Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PDGFBP01127 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDGFBP01127 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDGFBP01127 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PDGFBP01127 CCL19-202ENST00000378800 414 ntTSL 2 BASIC14.17□□□□□ -0.14
PDGFBP01127 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PDGFBP01127 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDGFBP01127 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC14.17□□□□□ -0.14
PDGFBP01127 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC14.17□□□□□ -0.14
PDGFBP01127 AP000533.1-201ENST00000456143 1177 ntBASIC14.17□□□□□ -0.14
PDGFBP01127 SLC25A15P1-201ENST00000456738 342 ntBASIC14.17□□□□□ -0.14
PDGFBP01127 RN7SL838P-201ENST00000481676 295 ntBASIC14.17□□□□□ -0.14
PDGFBP01127 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC14.17□□□□□ -0.14
PDGFBP01127 AP003040.1-201ENST00000532044 1024 ntBASIC14.17□□□□□ -0.14
PDGFBP01127 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC14.17□□□□□ -0.14
PDGFBP01127 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC14.17□□□□□ -0.14
PDGFBP01127 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC14.17□□□□□ -0.14
PDGFBP01127 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC14.17□□□□□ -0.14
PDGFBP01127 AC120498.5-201ENST00000561757 299 ntBASIC14.17□□□□□ -0.14
PDGFBP01127 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC14.17□□□□□ -0.14
PDGFBP01127 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC14.17□□□□□ -0.14
PDGFBP01127 RN7SL480P-201ENST00000581481 294 ntBASIC14.17□□□□□ -0.14
PDGFBP01127 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC14.17□□□□□ -0.14
PDGFBP01127 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC14.17□□□□□ -0.14
PDGFBP01127 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDGFBP01127 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDGFBP01127 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDGFBP01127 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDGFBP01127 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.17□□□□□ -0.14
PDGFBP01127 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
PDGFBP01127 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDGFBP01127 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.17□□□□□ -0.14
PDGFBP01127 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDGFBP01127 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDGFBP01127 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDGFBP01127 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC14.17□□□□□ -0.14
PDGFBP01127 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.17□□□□□ -0.14
PDGFBP01127 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDGFBP01127 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
PDGFBP01127 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC14.17□□□□□ -0.14
PDGFBP01127 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.16□□□□□ -0.14
PDGFBP01127 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.16□□□□□ -0.14
PDGFBP01127 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PDGFBP01127 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PDGFBP01127 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDGFBP01127 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDGFBP01127 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC14.16□□□□□ -0.14
PDGFBP01127 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
PDGFBP01127 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDGFBP01127 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.16□□□□□ -0.14
PDGFBP01127 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PDGFBP01127 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDGFBP01127 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDGFBP01127 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PDGFBP01127 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDGFBP01127 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDGFBP01127 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDGFBP01127 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
PDGFBP01127 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC14.16□□□□□ -0.14
PDGFBP01127 MIR339-201ENST00000362153 94 ntBASIC14.16□□□□□ -0.14
PDGFBP01127 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PDGFBP01127 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
PDGFBP01127 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PDGFBP01127 AC008494.1-201ENST00000497612 796 ntBASIC14.16□□□□□ -0.14
PDGFBP01127 ABCC6P1-203ENST00000565566 1170 ntBASIC14.16□□□□□ -0.14
PDGFBP01127 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC14.16□□□□□ -0.14
PDGFBP01127 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
PDGFBP01127 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC14.16□□□□□ -0.14
PDGFBP01127 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
PDGFBP01127 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
PDGFBP01127 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
PDGFBP01127 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.16□□□□□ -0.14
PDGFBP01127 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDGFBP01127 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDGFBP01127 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDGFBP01127 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.16□□□□□ -0.14
PDGFBP01127 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDGFBP01127 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PDGFBP01127 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.15□□□□□ -0.14
PDGFBP01127 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PDGFBP01127 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDGFBP01127 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDGFBP01127 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
PDGFBP01127 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
PDGFBP01127 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.15□□□□□ -0.14
PDGFBP01127 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDGFBP01127 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDGFBP01127 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.15□□□□□ -0.14
PDGFBP01127 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
PDGFBP01127 AC232323.1-201ENST00000540724 2099 ntBASIC14.15□□□□□ -0.14
PDGFBP01127 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC14.15□□□□□ -0.14
PDGFBP01127 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
PDGFBP01127 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PDGFBP01127 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
PDGFBP01127 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
PDGFBP01127 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
PDGFBP01127 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
PDGFBP01127 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
PDGFBP01127 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PDGFBP01127 KRT8P6-201ENST00000399259 1207 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms