Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 AC092933.1-201ENST00000393644 945 ntBASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 CICP12-201ENST00000455801 843 ntBASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 RN7SL713P-201ENST00000582127 302 ntBASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 AC027307.3-201ENST00000594262 1100 ntBASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 ZACNP1-201ENST00000612259 710 ntBASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 AC006453.4-201ENST00000636949 1252 ntBASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 AC004241.5-201ENST00000623870 2448 ntBASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 AC068760.1-201ENST00000493579 1953 ntBASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
POLR2J2Q9GZM3 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.33□□□□□ -0.27
POLR2J2Q9GZM3 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
POLR2J2Q9GZM3 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
POLR2J2Q9GZM3 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
POLR2J2Q9GZM3 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
POLR2J2Q9GZM3 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
POLR2J2Q9GZM3 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
POLR2J2Q9GZM3 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.33□□□□□ -0.27
POLR2J2Q9GZM3 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
POLR2J2Q9GZM3 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
POLR2J2Q9GZM3 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
POLR2J2Q9GZM3 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
POLR2J2Q9GZM3 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
POLR2J2Q9GZM3 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
POLR2J2Q9GZM3 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.33□□□□□ -0.28
POLR2J2Q9GZM3 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.33□□□□□ -0.28
POLR2J2Q9GZM3 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
POLR2J2Q9GZM3 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
POLR2J2Q9GZM3 AL365181.3-201ENST00000605886 3222 ntBASIC13.33□□□□□ -0.28
POLR2J2Q9GZM3 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
POLR2J2Q9GZM3 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
POLR2J2Q9GZM3 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
POLR2J2Q9GZM3 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
POLR2J2Q9GZM3 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
POLR2J2Q9GZM3 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC13.33□□□□□ -0.28
POLR2J2Q9GZM3 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
POLR2J2Q9GZM3 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
POLR2J2Q9GZM3 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC13.33□□□□□ -0.28
POLR2J2Q9GZM3 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
POLR2J2Q9GZM3 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms