Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS33AQ96AX1 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS33AQ96AX1 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VPS33AQ96AX1 MIR661-201ENST00000384842 89 ntBASIC13.87□□□□□ -0.19
VPS33AQ96AX1 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS33AQ96AX1 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.87□□□□□ -0.19
VPS33AQ96AX1 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
VPS33AQ96AX1 API5-211ENST00000534695 560 ntTSL 5 BASIC13.87□□□□□ -0.19
VPS33AQ96AX1 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.87□□□□□ -0.19
VPS33AQ96AX1 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.87□□□□□ -0.19
VPS33AQ96AX1 AC005586.2-201ENST00000563946 837 ntBASIC13.87□□□□□ -0.19
VPS33AQ96AX1 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.87□□□□□ -0.19
VPS33AQ96AX1 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.87□□□□□ -0.19
VPS33AQ96AX1 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
VPS33AQ96AX1 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.87□□□□□ -0.19
VPS33AQ96AX1 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.87□□□□□ -0.19
VPS33AQ96AX1 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.87□□□□□ -0.19
VPS33AQ96AX1 AC004233.3-201ENST00000607794 1269 ntBASIC13.87□□□□□ -0.19
VPS33AQ96AX1 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.87□□□□□ -0.19
VPS33AQ96AX1 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS33AQ96AX1 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
VPS33AQ96AX1 AL138709.1-201ENST00000614840 1693 ntBASIC13.87□□□□□ -0.19
VPS33AQ96AX1 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.87□□□□□ -0.19
VPS33AQ96AX1 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS33AQ96AX1 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VPS33AQ96AX1 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS33AQ96AX1 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS33AQ96AX1 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
VPS33AQ96AX1 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.87□□□□□ -0.19
VPS33AQ96AX1 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS33AQ96AX1 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VPS33AQ96AX1 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
VPS33AQ96AX1 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.87□□□□□ -0.19
VPS33AQ96AX1 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC13.87□□□□□ -0.19
VPS33AQ96AX1 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.87□□□□□ -0.19
VPS33AQ96AX1 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS33AQ96AX1 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS33AQ96AX1 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.87□□□□□ -0.19
VPS33AQ96AX1 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC13.87□□□□□ -0.19
VPS33AQ96AX1 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 RNA5SP421-201ENST00000516864 134 ntBASIC13.86□□□□□ -0.19
VPS33AQ96AX1 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 AC104506.1-201ENST00000609247 429 ntBASIC13.86□□□□□ -0.19
VPS33AQ96AX1 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 AC134312.5-201ENST00000568031 1313 ntBASIC13.86□□□□□ -0.19
VPS33AQ96AX1 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.86□□□□□ -0.19
VPS33AQ96AX1 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms