Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PMS1P54277 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PMS1P54277 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PMS1P54277 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PMS1P54277 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PMS1P54277 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
PMS1P54277 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC15.78■□□□□ 0.12
PMS1P54277 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PMS1P54277 AC007952.5-201ENST00000572818 1486 ntBASIC15.78■□□□□ 0.12
PMS1P54277 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PMS1P54277 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
PMS1P54277 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PMS1P54277 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PMS1P54277 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
PMS1P54277 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC15.77■□□□□ 0.12
PMS1P54277 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PMS1P54277 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PMS1P54277 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC15.77■□□□□ 0.12
PMS1P54277 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.77■□□□□ 0.12
PMS1P54277 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC15.77■□□□□ 0.12
PMS1P54277 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC15.77■□□□□ 0.12
PMS1P54277 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC15.77■□□□□ 0.12
PMS1P54277 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.12
PMS1P54277 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC15.77■□□□□ 0.12
PMS1P54277 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
PMS1P54277 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
PMS1P54277 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PMS1P54277 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PMS1P54277 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
PMS1P54277 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.77■□□□□ 0.12
PMS1P54277 RNMTL1P1-201ENST00000454103 560 ntBASIC15.77■□□□□ 0.12
PMS1P54277 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.77■□□□□ 0.12
PMS1P54277 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.77■□□□□ 0.12
PMS1P54277 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.77■□□□□ 0.12
PMS1P54277 AL512310.5-201ENST00000551999 515 ntBASIC15.77■□□□□ 0.12
PMS1P54277 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PMS1P54277 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.77■□□□□ 0.12
PMS1P54277 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.77■□□□□ 0.12
PMS1P54277 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC15.77■□□□□ 0.12
PMS1P54277 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC15.77■□□□□ 0.12
PMS1P54277 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.77■□□□□ 0.12
PMS1P54277 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC15.77■□□□□ 0.12
PMS1P54277 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PMS1P54277 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
PMS1P54277 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC15.77■□□□□ 0.11
PMS1P54277 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PMS1P54277 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.77■□□□□ 0.11
PMS1P54277 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC15.77■□□□□ 0.11
PMS1P54277 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PMS1P54277 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
PMS1P54277 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
PMS1P54277 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC15.77■□□□□ 0.11
PMS1P54277 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.77■□□□□ 0.11
PMS1P54277 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PMS1P54277 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PMS1P54277 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PMS1P54277 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC15.76■□□□□ 0.11
PMS1P54277 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PMS1P54277 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PMS1P54277 FAM90A7P-201ENST00000382628 1395 ntBASIC15.76■□□□□ 0.11
PMS1P54277 FAM90A23P-201ENST00000400136 1395 ntBASIC15.76■□□□□ 0.11
PMS1P54277 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PMS1P54277 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PMS1P54277 AP002353.1-201ENST00000528257 1599 ntBASIC15.76■□□□□ 0.11
PMS1P54277 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC15.76■□□□□ 0.11
PMS1P54277 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
PMS1P54277 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PMS1P54277 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
PMS1P54277 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PMS1P54277 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
PMS1P54277 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PMS1P54277 YBX1P6-201ENST00000442962 1002 ntBASIC15.76■□□□□ 0.11
PMS1P54277 KRT18P15-201ENST00000458108 1291 ntBASIC15.76■□□□□ 0.11
PMS1P54277 RPL18P13-201ENST00000478088 569 ntBASIC15.76■□□□□ 0.11
PMS1P54277 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
PMS1P54277 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PMS1P54277 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.76■□□□□ 0.11
PMS1P54277 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.76■□□□□ 0.11
PMS1P54277 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PMS1P54277 AC005324.6-201ENST00000587972 613 ntBASIC15.76■□□□□ 0.11
PMS1P54277 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PMS1P54277 AC092299.1-201ENST00000632679 757 ntBASIC15.76■□□□□ 0.11
PMS1P54277 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC15.76■□□□□ 0.11
PMS1P54277 COX11-210ENST00000639671 696 ntBASIC15.76■□□□□ 0.11
PMS1P54277 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
PMS1P54277 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC15.76■□□□□ 0.11
PMS1P54277 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PMS1P54277 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PMS1P54277 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PMS1P54277 AC018629.1-201ENST00000623381 1736 ntBASIC15.76■□□□□ 0.11
PMS1P54277 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
PMS1P54277 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PMS1P54277 DGCR9-201ENST00000609630 2415 ntBASIC15.76■□□□□ 0.11
PMS1P54277 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.76■□□□□ 0.11
PMS1P54277 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
PMS1P54277 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC15.76■□□□□ 0.11
PMS1P54277 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
PMS1P54277 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PMS1P54277 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC15.75■□□□□ 0.11
PMS1P54277 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms