Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00473A8K010 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00473A8K010 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC11.71□□□□□ -0.53
LINC00473A8K010 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC11.71□□□□□ -0.53
LINC00473A8K010 USB1-202ENST00000423271 1217 ntTSL 2 BASIC11.71□□□□□ -0.53
LINC00473A8K010 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC11.71□□□□□ -0.53
LINC00473A8K010 KRT43P-201ENST00000434019 910 ntBASIC11.71□□□□□ -0.53
LINC00473A8K010 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC11.71□□□□□ -0.53
LINC00473A8K010 HOMER2P2-201ENST00000451621 847 ntBASIC11.71□□□□□ -0.53
LINC00473A8K010 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00473A8K010 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
LINC00473A8K010 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00473A8K010 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00473A8K010 RBM8B-201ENST00000555532 525 ntBASIC11.71□□□□□ -0.53
LINC00473A8K010 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC11.71□□□□□ -0.53
LINC00473A8K010 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC11.71□□□□□ -0.53
LINC00473A8K010 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC11.71□□□□□ -0.53
LINC00473A8K010 AC021016.3-201ENST00000608367 477 ntBASIC11.71□□□□□ -0.53
LINC00473A8K010 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC11.71□□□□□ -0.53
LINC00473A8K010 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC11.71□□□□□ -0.53
LINC00473A8K010 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC11.71□□□□□ -0.53
LINC00473A8K010 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC11.71□□□□□ -0.53
LINC00473A8K010 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC11.71□□□□□ -0.53
LINC00473A8K010 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC11.71□□□□□ -0.53
LINC00473A8K010 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00473A8K010 MEX3B-202ENST00000558133 4333 ntBASIC11.71□□□□□ -0.53
LINC00473A8K010 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
LINC00473A8K010 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
LINC00473A8K010 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
LINC00473A8K010 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC11.71□□□□□ -0.54
LINC00473A8K010 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
LINC00473A8K010 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
LINC00473A8K010 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC00473A8K010 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
LINC00473A8K010 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC11.71□□□□□ -0.54
LINC00473A8K010 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.54
LINC00473A8K010 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
LINC00473A8K010 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC00473A8K010 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC11.71□□□□□ -0.54
LINC00473A8K010 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
LINC00473A8K010 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC00473A8K010 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
LINC00473A8K010 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC00473A8K010 AC135782.3-201ENST00000562782 2105 ntBASIC11.71□□□□□ -0.54
LINC00473A8K010 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC00473A8K010 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC11.71□□□□□ -0.54
LINC00473A8K010 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC00473A8K010 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC00473A8K010 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC00473A8K010 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
LINC00473A8K010 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC11.7□□□□□ -0.54
LINC00473A8K010 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00473A8K010 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC11.7□□□□□ -0.54
LINC00473A8K010 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC11.7□□□□□ -0.54
LINC00473A8K010 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00473A8K010 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00473A8K010 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00473A8K010 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00473A8K010 CICP20-201ENST00000443330 2801 ntBASIC11.7□□□□□ -0.54
LINC00473A8K010 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00473A8K010 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
LINC00473A8K010 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC11.7□□□□□ -0.54
LINC00473A8K010 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00473A8K010 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00473A8K010 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
LINC00473A8K010 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC11.7□□□□□ -0.54
LINC00473A8K010 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00473A8K010 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00473A8K010 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00473A8K010 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00473A8K010 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
LINC00473A8K010 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC11.7□□□□□ -0.54
LINC00473A8K010 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
LINC00473A8K010 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00473A8K010 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC11.7□□□□□ -0.54
LINC00473A8K010 COX5BP8-201ENST00000416911 349 ntBASIC11.7□□□□□ -0.54
LINC00473A8K010 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC11.7□□□□□ -0.54
LINC00473A8K010 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC11.7□□□□□ -0.54
LINC00473A8K010 AC100850.1-201ENST00000506768 649 ntBASIC11.7□□□□□ -0.54
LINC00473A8K010 NCK2-206ENST00000522586 490 ntTSL 5 BASIC11.7□□□□□ -0.54
LINC00473A8K010 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
LINC00473A8K010 MIR4783-201ENST00000580343 82 ntBASIC11.7□□□□□ -0.54
LINC00473A8K010 KRT18P8-201ENST00000581937 1246 ntBASIC11.7□□□□□ -0.54
LINC00473A8K010 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
LINC00473A8K010 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC11.7□□□□□ -0.54
LINC00473A8K010 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC11.7□□□□□ -0.54
LINC00473A8K010 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
LINC00473A8K010 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
LINC00473A8K010 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00473A8K010 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00473A8K010 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC11.7□□□□□ -0.54
LINC00473A8K010 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00473A8K010 COL6A4P2-202ENST00000504443 2753 ntBASIC11.7□□□□□ -0.54
LINC00473A8K010 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00473A8K010 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
LINC00473A8K010 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00473A8K010 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00473A8K010 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC11.7□□□□□ -0.54
LINC00473A8K010 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00473A8K010 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms