Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC16.83■□□□□ 0.28
TRIM47Q96LD4 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM47Q96LD4 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC16.83■□□□□ 0.28
TRIM47Q96LD4 AC027237.1-201ENST00000560942 655 ntBASIC16.83■□□□□ 0.28
TRIM47Q96LD4 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC16.83■□□□□ 0.28
TRIM47Q96LD4 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM47Q96LD4 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.83■□□□□ 0.28
TRIM47Q96LD4 AC005041.3-201ENST00000606287 649 ntBASIC16.83■□□□□ 0.28
TRIM47Q96LD4 BX088702.1-201ENST00000610784 235 ntBASIC16.83■□□□□ 0.28
TRIM47Q96LD4 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC16.83■□□□□ 0.28
TRIM47Q96LD4 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.83■□□□□ 0.28
TRIM47Q96LD4 AC148477.9-201ENST00000623974 539 ntBASIC16.83■□□□□ 0.28
TRIM47Q96LD4 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM47Q96LD4 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TRIM47Q96LD4 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
TRIM47Q96LD4 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM47Q96LD4 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM47Q96LD4 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.83■□□□□ 0.28
TRIM47Q96LD4 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
TRIM47Q96LD4 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM47Q96LD4 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM47Q96LD4 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM47Q96LD4 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM47Q96LD4 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM47Q96LD4 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRIM47Q96LD4 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM47Q96LD4 TNN-203ENST00000622870 3719 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM47Q96LD4 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM47Q96LD4 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM47Q96LD4 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
TRIM47Q96LD4 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM47Q96LD4 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM47Q96LD4 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM47Q96LD4 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM47Q96LD4 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TRIM47Q96LD4 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM47Q96LD4 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM47Q96LD4 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM47Q96LD4 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM47Q96LD4 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM47Q96LD4 RNA5SP359-201ENST00000364838 113 ntBASIC16.82■□□□□ 0.28
TRIM47Q96LD4 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRIM47Q96LD4 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC16.82■□□□□ 0.28
TRIM47Q96LD4 FAU-202ENST00000434372 533 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM47Q96LD4 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC16.82■□□□□ 0.28
TRIM47Q96LD4 AL354861.1-201ENST00000445213 355 ntBASIC16.82■□□□□ 0.28
TRIM47Q96LD4 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC16.82■□□□□ 0.28
TRIM47Q96LD4 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM47Q96LD4 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM47Q96LD4 AP000911.2-201ENST00000534330 502 ntBASIC16.82■□□□□ 0.28
TRIM47Q96LD4 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM47Q96LD4 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM47Q96LD4 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRIM47Q96LD4 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM47Q96LD4 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM47Q96LD4 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM47Q96LD4 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM47Q96LD4 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM47Q96LD4 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM47Q96LD4 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM47Q96LD4 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM47Q96LD4 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM47Q96LD4 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM47Q96LD4 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM47Q96LD4 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM47Q96LD4 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM47Q96LD4 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TRIM47Q96LD4 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM47Q96LD4 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM47Q96LD4 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM47Q96LD4 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC16.81■□□□□ 0.28
TRIM47Q96LD4 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM47Q96LD4 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
TRIM47Q96LD4 KRT18P36-201ENST00000411618 1276 ntBASIC16.81■□□□□ 0.28
TRIM47Q96LD4 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC16.81■□□□□ 0.28
TRIM47Q96LD4 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.81■□□□□ 0.28
TRIM47Q96LD4 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM47Q96LD4 AC092638.2-201ENST00000441105 947 ntBASIC16.81■□□□□ 0.28
TRIM47Q96LD4 AL035414.1-201ENST00000451327 857 ntBASIC16.81■□□□□ 0.28
TRIM47Q96LD4 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC16.81■□□□□ 0.28
TRIM47Q96LD4 AC114947.1-202ENST00000514136 344 ntBASIC16.81■□□□□ 0.28
TRIM47Q96LD4 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.81■□□□□ 0.28
TRIM47Q96LD4 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC16.81■□□□□ 0.28
TRIM47Q96LD4 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM47Q96LD4 CR383656.3-201ENST00000551315 183 ntBASIC16.81■□□□□ 0.28
TRIM47Q96LD4 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC16.81■□□□□ 0.28
TRIM47Q96LD4 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC16.81■□□□□ 0.28
TRIM47Q96LD4 RN7SL470P-201ENST00000583069 259 ntBASIC16.81■□□□□ 0.28
TRIM47Q96LD4 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM47Q96LD4 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC16.81■□□□□ 0.28
TRIM47Q96LD4 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC16.81■□□□□ 0.28
TRIM47Q96LD4 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM47Q96LD4 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM47Q96LD4 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM47Q96LD4 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
TRIM47Q96LD4 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM47Q96LD4 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM47Q96LD4 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM47Q96LD4 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM47Q96LD4 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms