Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 AL512384.1-201ENST00000406683 331 ntBASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 TTTY23B-201ENST00000442790 549 ntBASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 AC131206.1-201ENST00000538078 1211 ntBASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 FP325330.2-201ENST00000624219 5630 ntBASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 EDF1-203ENST00000371649 790 ntTSL 2 BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 AC005229.1-201ENST00000392885 409 ntBASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 FO681548.1-201ENST00000455617 1132 ntBASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 AP001889.1-201ENST00000525414 633 ntBASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 SRP9-204ENST00000619790 377 ntTSL 2 BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
RTN4IP1Q8WWV3 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms