Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 OR8S1-201ENST00000310194 1080 ntBASIC12.68□□□□□ -0.38
C11orf88Q6PI97 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 RASL12-203ENST00000434605 982 ntTSL 2 BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 PTPA-220ENST00000436883 532 ntTSL 4 BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 NEU3-203ENST00000529024 581 ntTSL 3 BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 API5-211ENST00000534695 560 ntTSL 5 BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 AC104794.3-201ENST00000566840 1248 ntBASIC12.68□□□□□ -0.38
C11orf88Q6PI97 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 AC004840.1-201ENST00000636359 365 ntBASIC12.68□□□□□ -0.38
C11orf88Q6PI97 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 VWA8-203ENST00000379310 7147 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
C11orf88Q6PI97 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 ERCC5-201ENST00000355739 5082 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 ERI1-209ENST00000523898 5036 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 AC090505.1-201ENST00000430515 1834 ntBASIC12.67□□□□□ -0.38
C11orf88Q6PI97 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 AL354702.1-201ENST00000442006 1960 ntBASIC12.67□□□□□ -0.38
C11orf88Q6PI97 AC092123.2-201ENST00000611189 5421 ntBASIC12.67□□□□□ -0.38
C11orf88Q6PI97 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 SPDYE19P-201ENST00000338590 713 ntBASIC12.67□□□□□ -0.38
C11orf88Q6PI97 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 AC104457.1-201ENST00000401024 814 ntBASIC12.67□□□□□ -0.38
C11orf88Q6PI97 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 TIMM17BP1-201ENST00000545713 516 ntBASIC12.67□□□□□ -0.38
C11orf88Q6PI97 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 AC074044.1-201ENST00000609673 707 ntBASIC12.67□□□□□ -0.38
C11orf88Q6PI97 TEX48-202ENST00000612244 662 ntTSL 3 BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 RAD1-203ENST00000382038 5770 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 AC111170.3-201ENST00000624282 2464 ntBASIC12.67□□□□□ -0.38
C11orf88Q6PI97 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
C11orf88Q6PI97 SLC7A15P-201ENST00000424028 1363 ntBASIC12.67□□□□□ -0.38
C11orf88Q6PI97 LILRP1-201ENST00000444199 1370 ntBASIC12.67□□□□□ -0.38
C11orf88Q6PI97 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms