Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
APOC4P55056 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
APOC4P55056 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
APOC4P55056 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC10.55□□□□□ -0.72
APOC4P55056 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
APOC4P55056 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC10.55□□□□□ -0.72
APOC4P55056 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC10.55□□□□□ -0.72
APOC4P55056 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC10.55□□□□□ -0.72
APOC4P55056 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
APOC4P55056 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
APOC4P55056 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC10.55□□□□□ -0.72
APOC4P55056 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
APOC4P55056 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
APOC4P55056 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
APOC4P55056 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
APOC4P55056 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC10.55□□□□□ -0.72
APOC4P55056 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC10.55□□□□□ -0.72
APOC4P55056 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC10.55□□□□□ -0.72
APOC4P55056 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC10.55□□□□□ -0.72
APOC4P55056 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
APOC4P55056 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC10.55□□□□□ -0.72
APOC4P55056 EEF1DP6-201ENST00000449232 372 ntBASIC10.55□□□□□ -0.72
APOC4P55056 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC10.55□□□□□ -0.72
APOC4P55056 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC10.55□□□□□ -0.72
APOC4P55056 RNA5SP423-201ENST00000517127 109 ntBASIC10.55□□□□□ -0.72
APOC4P55056 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC10.55□□□□□ -0.72
APOC4P55056 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC10.55□□□□□ -0.72
APOC4P55056 KRT8P1-201ENST00000557533 1207 ntBASIC10.55□□□□□ -0.72
APOC4P55056 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
APOC4P55056 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
APOC4P55056 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
APOC4P55056 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC10.55□□□□□ -0.72
APOC4P55056 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC10.55□□□□□ -0.72
APOC4P55056 AL109837.1-201ENST00000603272 613 ntBASIC10.55□□□□□ -0.72
APOC4P55056 AL022334.2-201ENST00000610000 484 ntBASIC10.55□□□□□ -0.72
APOC4P55056 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC10.55□□□□□ -0.72
APOC4P55056 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC10.55□□□□□ -0.72
APOC4P55056 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC10.55□□□□□ -0.72
APOC4P55056 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
APOC4P55056 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC10.55□□□□□ -0.72
APOC4P55056 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
APOC4P55056 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC10.55□□□□□ -0.72
APOC4P55056 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
APOC4P55056 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
APOC4P55056 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
APOC4P55056 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
APOC4P55056 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
APOC4P55056 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
APOC4P55056 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC10.55□□□□□ -0.72
APOC4P55056 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
APOC4P55056 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
APOC4P55056 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
APOC4P55056 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
APOC4P55056 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC10.55□□□□□ -0.72
APOC4P55056 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
APOC4P55056 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
APOC4P55056 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
APOC4P55056 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
APOC4P55056 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
APOC4P55056 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
APOC4P55056 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
APOC4P55056 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
APOC4P55056 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC10.54□□□□□ -0.72
APOC4P55056 AC015909.3-201ENST00000572855 1794 ntBASIC10.54□□□□□ -0.72
APOC4P55056 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
APOC4P55056 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC10.54□□□□□ -0.72
APOC4P55056 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
APOC4P55056 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
APOC4P55056 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
APOC4P55056 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
APOC4P55056 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
APOC4P55056 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
APOC4P55056 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
APOC4P55056 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC10.54□□□□□ -0.72
APOC4P55056 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
APOC4P55056 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
APOC4P55056 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC10.54□□□□□ -0.72
APOC4P55056 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
APOC4P55056 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
APOC4P55056 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
APOC4P55056 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC10.54□□□□□ -0.72
APOC4P55056 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
APOC4P55056 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
APOC4P55056 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC10.54□□□□□ -0.72
APOC4P55056 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
APOC4P55056 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
APOC4P55056 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
APOC4P55056 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC10.54□□□□□ -0.72
APOC4P55056 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC10.54□□□□□ -0.72
APOC4P55056 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC10.54□□□□□ -0.72
APOC4P55056 AL583805.1-201ENST00000391389 531 ntBASIC10.54□□□□□ -0.72
APOC4P55056 BANF1P3-201ENST00000412556 261 ntBASIC10.54□□□□□ -0.72
APOC4P55056 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC10.54□□□□□ -0.72
APOC4P55056 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
APOC4P55056 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC10.54□□□□□ -0.72
APOC4P55056 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
APOC4P55056 RPSAP15-201ENST00000448168 861 ntBASIC10.54□□□□□ -0.72
APOC4P55056 AP000358.1-201ENST00000456260 156 ntBASIC10.54□□□□□ -0.72
APOC4P55056 RN7SL277P-201ENST00000481521 288 ntBASIC10.54□□□□□ -0.72
APOC4P55056 RN7SL67P-201ENST00000492147 296 ntBASIC10.54□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms