Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CTNNA1P35221 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CTNNA1P35221 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTNNA1P35221 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTNNA1P35221 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CTNNA1P35221 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTNNA1P35221 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC15.26■□□□□ 0.03
CTNNA1P35221 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CTNNA1P35221 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.26■□□□□ 0.03
CTNNA1P35221 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CTNNA1P35221 USP3-204ENST00000540797 5474 ntTSL 2 BASIC15.26■□□□□ 0.03
CTNNA1P35221 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTNNA1P35221 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTNNA1P35221 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CTNNA1P35221 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.26■□□□□ 0.03
CTNNA1P35221 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTNNA1P35221 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC15.25■□□□□ 0.03
CTNNA1P35221 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTNNA1P35221 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC15.25■□□□□ 0.03
CTNNA1P35221 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTNNA1P35221 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTNNA1P35221 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTNNA1P35221 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTNNA1P35221 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTNNA1P35221 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTNNA1P35221 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTNNA1P35221 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTNNA1P35221 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTNNA1P35221 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTNNA1P35221 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTNNA1P35221 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTNNA1P35221 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC15.25■□□□□ 0.03
CTNNA1P35221 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTNNA1P35221 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CTNNA1P35221 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTNNA1P35221 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTNNA1P35221 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTNNA1P35221 FAM8A4P-201ENST00000435433 1213 ntBASIC15.25■□□□□ 0.03
CTNNA1P35221 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CTNNA1P35221 CICP12-201ENST00000455801 843 ntBASIC15.25■□□□□ 0.03
CTNNA1P35221 TERF1P3-201ENST00000505638 1227 ntBASIC15.25■□□□□ 0.03
CTNNA1P35221 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTNNA1P35221 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.25■□□□□ 0.03
CTNNA1P35221 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.25■□□□□ 0.03
CTNNA1P35221 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.25■□□□□ 0.03
CTNNA1P35221 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.25■□□□□ 0.03
CTNNA1P35221 MIR4745-201ENST00000577608 62 ntBASIC15.25■□□□□ 0.03
CTNNA1P35221 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.25■□□□□ 0.03
CTNNA1P35221 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTNNA1P35221 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.25■□□□□ 0.03
CTNNA1P35221 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTNNA1P35221 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC15.25■□□□□ 0.03
CTNNA1P35221 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTNNA1P35221 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTNNA1P35221 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC15.25■□□□□ 0.03
CTNNA1P35221 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTNNA1P35221 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTNNA1P35221 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTNNA1P35221 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CTNNA1P35221 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTNNA1P35221 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CTNNA1P35221 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC15.25■□□□□ 0.03
CTNNA1P35221 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CTNNA1P35221 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTNNA1P35221 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC15.25■□□□□ 0.03
CTNNA1P35221 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTNNA1P35221 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CTNNA1P35221 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTNNA1P35221 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC15.25■□□□□ 0.03
CTNNA1P35221 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTNNA1P35221 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTNNA1P35221 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CTNNA1P35221 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CTNNA1P35221 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.24■□□□□ 0.03
CTNNA1P35221 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CTNNA1P35221 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTNNA1P35221 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTNNA1P35221 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTNNA1P35221 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CTNNA1P35221 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CTNNA1P35221 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTNNA1P35221 USP17L6P-201ENST00000382470 1197 ntBASIC15.24■□□□□ 0.03
CTNNA1P35221 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CTNNA1P35221 AC092933.1-201ENST00000393644 945 ntBASIC15.24■□□□□ 0.03
CTNNA1P35221 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.24■□□□□ 0.03
CTNNA1P35221 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CTNNA1P35221 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.24■□□□□ 0.03
CTNNA1P35221 CRB3P1-201ENST00000449338 276 ntBASIC15.24■□□□□ 0.03
CTNNA1P35221 AL035414.1-201ENST00000451327 857 ntBASIC15.24■□□□□ 0.03
CTNNA1P35221 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.24■□□□□ 0.03
CTNNA1P35221 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.24■□□□□ 0.03
CTNNA1P35221 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
CTNNA1P35221 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CTNNA1P35221 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTNNA1P35221 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.24■□□□□ 0.03
CTNNA1P35221 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.24■□□□□ 0.03
CTNNA1P35221 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CTNNA1P35221 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.24■□□□□ 0.03
CTNNA1P35221 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.24■□□□□ 0.03
CTNNA1P35221 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms