Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
KCNIP3Q9Y2W7 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.13□□□□□ -0.47
KCNIP3Q9Y2W7 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
KCNIP3Q9Y2W7 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.13□□□□□ -0.47
KCNIP3Q9Y2W7 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC12.13□□□□□ -0.47
KCNIP3Q9Y2W7 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
KCNIP3Q9Y2W7 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
KCNIP3Q9Y2W7 PGAM5P1-201ENST00000518923 814 ntBASIC12.13□□□□□ -0.47
KCNIP3Q9Y2W7 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC12.13□□□□□ -0.47
KCNIP3Q9Y2W7 AC103988.2-201ENST00000561804 725 ntBASIC12.13□□□□□ -0.47
KCNIP3Q9Y2W7 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC12.13□□□□□ -0.47
KCNIP3Q9Y2W7 SSH2-210ENST00000582084 560 ntTSL 3 BASIC12.13□□□□□ -0.47
KCNIP3Q9Y2W7 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC12.13□□□□□ -0.47
KCNIP3Q9Y2W7 TEX48-202ENST00000612244 662 ntTSL 3 BASIC12.13□□□□□ -0.47
KCNIP3Q9Y2W7 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
KCNIP3Q9Y2W7 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
KCNIP3Q9Y2W7 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
KCNIP3Q9Y2W7 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
KCNIP3Q9Y2W7 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
KCNIP3Q9Y2W7 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
KCNIP3Q9Y2W7 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC12.13□□□□□ -0.47
KCNIP3Q9Y2W7 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
KCNIP3Q9Y2W7 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC12.13□□□□□ -0.47
KCNIP3Q9Y2W7 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
KCNIP3Q9Y2W7 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
KCNIP3Q9Y2W7 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
KCNIP3Q9Y2W7 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.13□□□□□ -0.47
KCNIP3Q9Y2W7 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
KCNIP3Q9Y2W7 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.13□□□□□ -0.47
KCNIP3Q9Y2W7 AC009474.1-201ENST00000455096 1565 ntBASIC12.13□□□□□ -0.47
KCNIP3Q9Y2W7 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
KCNIP3Q9Y2W7 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
KCNIP3Q9Y2W7 AL445209.1-201ENST00000607269 3491 ntBASIC12.13□□□□□ -0.47
KCNIP3Q9Y2W7 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
KCNIP3Q9Y2W7 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
KCNIP3Q9Y2W7 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.13□□□□□ -0.47
KCNIP3Q9Y2W7 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.13□□□□□ -0.47
KCNIP3Q9Y2W7 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
KCNIP3Q9Y2W7 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
KCNIP3Q9Y2W7 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 AC139712.1-201ENST00000378256 1875 ntBASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 AL391647.1-201ENST00000395664 511 ntBASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 YBX1P5-201ENST00000509441 847 ntBASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 AC027369.6-201ENST00000525520 931 ntBASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 AC092865.5-201ENST00000545435 363 ntBASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 AL049840.4-201ENST00000602422 811 ntBASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 TRUB2-201ENST00000372890 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 TNRC18P1-201ENST00000502875 3650 ntBASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 FAM131B-203ENST00000409408 5856 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 AOC4P-203ENST00000566825 2289 ntBASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
KCNIP3Q9Y2W7 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms