Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RTN4IP1Q8WWV3 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RTN4IP1Q8WWV3 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RTN4IP1Q8WWV3 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
RTN4IP1Q8WWV3 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RTN4IP1Q8WWV3 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
RTN4IP1Q8WWV3 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
RTN4IP1Q8WWV3 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
RTN4IP1Q8WWV3 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RTN4IP1Q8WWV3 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
RTN4IP1Q8WWV3 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RTN4IP1Q8WWV3 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
RTN4IP1Q8WWV3 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
RTN4IP1Q8WWV3 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
RTN4IP1Q8WWV3 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
RTN4IP1Q8WWV3 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
RTN4IP1Q8WWV3 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.21□□□□□ -0.46
RTN4IP1Q8WWV3 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RTN4IP1Q8WWV3 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
RTN4IP1Q8WWV3 AC019294.4-201ENST00000561777 2905 ntBASIC12.21□□□□□ -0.46
RTN4IP1Q8WWV3 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 CU639417.3-201ENST00000624240 1404 ntBASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 AL355864.2-201ENST00000447420 863 ntBASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 INE1-201ENST00000456273 945 ntBASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 TAF8-206ENST00000472818 719 ntTSL 2 BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 AC015936.2-201ENST00000593177 259 ntBASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 AC145423.3-201ENST00000615987 467 ntBASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 AC004241.5-201ENST00000623870 2448 ntBASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
RTN4IP1Q8WWV3 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 TUBB8P4-201ENST00000511806 1324 ntBASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
RTN4IP1Q8WWV3 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms