Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CPEB3Q8NE35 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CPEB3Q8NE35 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CPEB3Q8NE35 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CPEB3Q8NE35 AC004899.1-201ENST00000424687 1714 ntBASIC12.65□□□□□ -0.38
CPEB3Q8NE35 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CPEB3Q8NE35 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
CPEB3Q8NE35 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
CPEB3Q8NE35 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
CPEB3Q8NE35 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 RPS3-201ENST00000278572 907 ntTSL 3 BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 KRTAP10-13P-201ENST00000412914 571 ntBASIC12.64□□□□□ -0.39
CPEB3Q8NE35 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 APOA2-204ENST00000464492 530 ntTSL 3 BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 AC006122.1-201ENST00000493323 440 ntBASIC12.64□□□□□ -0.39
CPEB3Q8NE35 SCARNA21-201ENST00000517026 139 ntBASIC12.64□□□□□ -0.39
CPEB3Q8NE35 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 AGER-214ENST00000538695 487 ntTSL 2 BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 BNIP3P13-201ENST00000599968 566 ntBASIC12.64□□□□□ -0.39
CPEB3Q8NE35 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.64□□□□□ -0.39
CPEB3Q8NE35 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 AC022748.3-201ENST00000621828 275 ntBASIC12.64□□□□□ -0.39
CPEB3Q8NE35 ABBA01031663.1-201ENST00000635630 790 ntBASIC12.64□□□□□ -0.39
CPEB3Q8NE35 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.64□□□□□ -0.39
CPEB3Q8NE35 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CPEB3Q8NE35 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CPEB3Q8NE35 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CPEB3Q8NE35 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CPEB3Q8NE35 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CPEB3Q8NE35 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
CPEB3Q8NE35 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CPEB3Q8NE35 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
CPEB3Q8NE35 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CPEB3Q8NE35 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CPEB3Q8NE35 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CPEB3Q8NE35 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CPEB3Q8NE35 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CPEB3Q8NE35 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CPEB3Q8NE35 AL022313.4-201ENST00000562756 2046 ntBASIC12.63□□□□□ -0.39
CPEB3Q8NE35 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CPEB3Q8NE35 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CPEB3Q8NE35 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.63□□□□□ -0.39
CPEB3Q8NE35 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC12.63□□□□□ -0.39
CPEB3Q8NE35 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC12.63□□□□□ -0.39
CPEB3Q8NE35 VDAC1P1-201ENST00000439229 848 ntBASIC12.63□□□□□ -0.39
CPEB3Q8NE35 AC007274.1-201ENST00000439805 662 ntBASIC12.63□□□□□ -0.39
CPEB3Q8NE35 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC12.63□□□□□ -0.39
CPEB3Q8NE35 AC104306.2-201ENST00000451877 341 ntBASIC12.63□□□□□ -0.39
CPEB3Q8NE35 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC12.63□□□□□ -0.39
CPEB3Q8NE35 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC12.63□□□□□ -0.39
CPEB3Q8NE35 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
CPEB3Q8NE35 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC12.63□□□□□ -0.39
CPEB3Q8NE35 AC008805.1-201ENST00000590892 364 ntBASIC12.63□□□□□ -0.39
CPEB3Q8NE35 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms