Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 CHMP1AP1-201ENST00000445563 662 ntBASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 HOMER2P2-201ENST00000451621 847 ntBASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 TMEM198B-204ENST00000484016 896 ntBASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 ORC6-206ENST00000568364 888 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 AC008825.2-201ENST00000603374 718 ntBASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00346Q8IVM7 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 AC010141.1-201ENST00000411585 623 ntBASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 AC026954.1-201ENST00000429771 1293 ntBASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 RPL7P3-201ENST00000441388 714 ntBASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 WNT11-204ENST00000621122 789 ntTSL 5 BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00346Q8IVM7 AL365181.3-201ENST00000605886 3222 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms