Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HOXA1P49639 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
HOXA1P49639 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
HOXA1P49639 WRB-204ENST00000398753 699 ntTSL 3 BASIC12.06□□□□□ -0.48
HOXA1P49639 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HOXA1P49639 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
HOXA1P49639 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.06□□□□□ -0.48
HOXA1P49639 AC004967.1-201ENST00000453589 447 ntBASIC12.06□□□□□ -0.48
HOXA1P49639 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
HOXA1P49639 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC12.06□□□□□ -0.48
HOXA1P49639 HLA-J-203ENST00000494367 1087 ntBASIC12.06□□□□□ -0.48
HOXA1P49639 MEIS3P1-201ENST00000495167 958 ntBASIC12.06□□□□□ -0.48
HOXA1P49639 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
HOXA1P49639 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC12.06□□□□□ -0.48
HOXA1P49639 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.06□□□□□ -0.48
HOXA1P49639 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.06□□□□□ -0.48
HOXA1P49639 AC140878.1-201ENST00000565277 250 ntBASIC12.06□□□□□ -0.48
HOXA1P49639 AC092337.1-201ENST00000568699 1129 ntBASIC12.06□□□□□ -0.48
HOXA1P49639 AC107373.2-201ENST00000607735 490 ntBASIC12.06□□□□□ -0.48
HOXA1P49639 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC12.06□□□□□ -0.48
HOXA1P49639 AC134684.3-201ENST00000641758 218 ntBASIC12.06□□□□□ -0.48
HOXA1P49639 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
HOXA1P49639 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
HOXA1P49639 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HOXA1P49639 MAP1S-202ENST00000544059 3399 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
HOXA1P49639 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
HOXA1P49639 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HOXA1P49639 AC023794.5-201ENST00000564380 2157 ntBASIC12.06□□□□□ -0.48
HOXA1P49639 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
HOXA1P49639 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
HOXA1P49639 AC126564.1-201ENST00000623628 2013 ntBASIC12.06□□□□□ -0.48
HOXA1P49639 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HOXA1P49639 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
HOXA1P49639 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
HOXA1P49639 AC093525.8-201ENST00000624099 1342 ntBASIC12.06□□□□□ -0.48
HOXA1P49639 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HOXA1P49639 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.06□□□□□ -0.48
HOXA1P49639 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
HOXA1P49639 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.06□□□□□ -0.48
HOXA1P49639 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.06□□□□□ -0.48
HOXA1P49639 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.06□□□□□ -0.48
HOXA1P49639 AGGF1P1-201ENST00000509500 2073 ntBASIC12.06□□□□□ -0.48
HOXA1P49639 ARPP21-213ENST00000428373 3150 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
HOXA1P49639 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
HOXA1P49639 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HOXA1P49639 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
HOXA1P49639 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC12.05□□□□□ -0.48
HOXA1P49639 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.05□□□□□ -0.48
HOXA1P49639 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HOXA1P49639 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
HOXA1P49639 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
HOXA1P49639 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.05□□□□□ -0.48
HOXA1P49639 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
HOXA1P49639 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.05□□□□□ -0.48
HOXA1P49639 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC12.05□□□□□ -0.48
HOXA1P49639 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
HOXA1P49639 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HOXA1P49639 CPT1A-205ENST00000539743 2382 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
HOXA1P49639 KRT8P22-201ENST00000562317 1415 ntBASIC12.05□□□□□ -0.48
HOXA1P49639 TP73-203ENST00000357733 4899 ntTSL 5 BASIC12.05□□□□□ -0.48
HOXA1P49639 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
HOXA1P49639 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC12.05□□□□□ -0.48
HOXA1P49639 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
HOXA1P49639 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HOXA1P49639 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.05□□□□□ -0.48
HOXA1P49639 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
HOXA1P49639 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
HOXA1P49639 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HOXA1P49639 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
HOXA1P49639 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
HOXA1P49639 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
HOXA1P49639 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HOXA1P49639 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
HOXA1P49639 AL645937.2-201ENST00000396808 931 ntBASIC12.05□□□□□ -0.48
HOXA1P49639 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.05□□□□□ -0.48
HOXA1P49639 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC12.05□□□□□ -0.48
HOXA1P49639 HLA-K-203ENST00000430151 1046 ntBASIC12.05□□□□□ -0.48
HOXA1P49639 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC12.05□□□□□ -0.48
HOXA1P49639 FAM86GP-201ENST00000448322 971 ntBASIC12.05□□□□□ -0.48
HOXA1P49639 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC12.05□□□□□ -0.48
HOXA1P49639 AC067863.1-201ENST00000494933 530 ntBASIC12.05□□□□□ -0.48
HOXA1P49639 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.05□□□□□ -0.48
HOXA1P49639 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC12.05□□□□□ -0.48
HOXA1P49639 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
HOXA1P49639 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.05□□□□□ -0.48
HOXA1P49639 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HOXA1P49639 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HOXA1P49639 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.05□□□□□ -0.48
HOXA1P49639 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
HOXA1P49639 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.05□□□□□ -0.48
HOXA1P49639 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC12.05□□□□□ -0.48
HOXA1P49639 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
HOXA1P49639 AL844908.2-201ENST00000609461 460 ntBASIC12.05□□□□□ -0.48
HOXA1P49639 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
HOXA1P49639 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
HOXA1P49639 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
HOXA1P49639 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
HOXA1P49639 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HOXA1P49639 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC12.05□□□□□ -0.48
HOXA1P49639 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 260.2 ms