Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 NCLP1-201ENST00000445357 1963 ntBASIC15.82■□□□□ 0.12
KRT9P35527 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
KRT9P35527 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
KRT9P35527 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT9P35527 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC15.81■□□□□ 0.12
KRT9P35527 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT9P35527 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC15.81■□□□□ 0.12
KRT9P35527 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT9P35527 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
KRT9P35527 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT9P35527 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT9P35527 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT9P35527 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT9P35527 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
KRT9P35527 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT9P35527 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT9P35527 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
KRT9P35527 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT9P35527 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT9P35527 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT9P35527 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
KRT9P35527 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.81■□□□□ 0.12
KRT9P35527 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
KRT9P35527 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT9P35527 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT9P35527 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
KRT9P35527 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT9P35527 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT9P35527 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT9P35527 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC15.81■□□□□ 0.12
KRT9P35527 RN7SKP175-201ENST00000408472 289 ntBASIC15.81■□□□□ 0.12
KRT9P35527 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
KRT9P35527 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
KRT9P35527 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.81■□□□□ 0.12
KRT9P35527 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT9P35527 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT9P35527 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT9P35527 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.81■□□□□ 0.12
KRT9P35527 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT9P35527 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
KRT9P35527 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.81■□□□□ 0.12
KRT9P35527 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
KRT9P35527 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.81■□□□□ 0.12
KRT9P35527 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.81■□□□□ 0.12
KRT9P35527 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
KRT9P35527 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.81■□□□□ 0.12
KRT9P35527 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.81■□□□□ 0.12
KRT9P35527 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
KRT9P35527 AC244669.2-201ENST00000612320 853 ntBASIC15.81■□□□□ 0.12
KRT9P35527 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.81■□□□□ 0.12
KRT9P35527 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
KRT9P35527 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.81■□□□□ 0.12
KRT9P35527 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT9P35527 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
KRT9P35527 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT9P35527 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC15.81■□□□□ 0.12
KRT9P35527 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
KRT9P35527 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT9P35527 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC15.81■□□□□ 0.12
KRT9P35527 NUTM2HP-201ENST00000442076 2498 ntBASIC15.8■□□□□ 0.12
KRT9P35527 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC15.8■□□□□ 0.12
KRT9P35527 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT9P35527 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT9P35527 AL591122.2-201ENST00000624125 1853 ntBASIC15.8■□□□□ 0.12
KRT9P35527 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
KRT9P35527 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT9P35527 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
KRT9P35527 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT9P35527 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
KRT9P35527 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.8■□□□□ 0.12
KRT9P35527 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.8■□□□□ 0.12
KRT9P35527 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.8■□□□□ 0.12
KRT9P35527 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.8■□□□□ 0.12
KRT9P35527 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
KRT9P35527 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT9P35527 CD8B2-202ENST00000417670 633 ntBASIC15.8■□□□□ 0.12
KRT9P35527 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.8■□□□□ 0.12
KRT9P35527 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
KRT9P35527 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.8■□□□□ 0.12
KRT9P35527 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.8■□□□□ 0.12
KRT9P35527 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
KRT9P35527 AC106820.3-201ENST00000561653 397 ntBASIC15.8■□□□□ 0.12
KRT9P35527 AC005586.2-201ENST00000563946 837 ntBASIC15.8■□□□□ 0.12
KRT9P35527 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.8■□□□□ 0.12
KRT9P35527 OR10B1P-201ENST00000601666 907 ntBASIC15.8■□□□□ 0.12
KRT9P35527 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.8■□□□□ 0.12
KRT9P35527 AC104506.1-201ENST00000609247 429 ntBASIC15.8■□□□□ 0.12
KRT9P35527 AC012645.4-201ENST00000610691 1061 ntBASIC15.8■□□□□ 0.12
KRT9P35527 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.8■□□□□ 0.12
KRT9P35527 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.8■□□□□ 0.12
KRT9P35527 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
KRT9P35527 AC004241.5-201ENST00000623870 2448 ntBASIC15.8■□□□□ 0.12
KRT9P35527 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.8■□□□□ 0.12
KRT9P35527 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT9P35527 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
KRT9P35527 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC15.8■□□□□ 0.12
KRT9P35527 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT9P35527 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT9P35527 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
KRT9P35527 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms