Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CCND1P24385 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCND1P24385 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC14.6□□□□□ -0.07
CCND1P24385 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCND1P24385 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CCND1P24385 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCND1P24385 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CCND1P24385 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCND1P24385 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCND1P24385 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCND1P24385 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.6□□□□□ -0.07
CCND1P24385 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.6□□□□□ -0.07
CCND1P24385 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCND1P24385 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CCND1P24385 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.6□□□□□ -0.07
CCND1P24385 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCND1P24385 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCND1P24385 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCND1P24385 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC14.59□□□□□ -0.07
CCND1P24385 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
CCND1P24385 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.59□□□□□ -0.07
CCND1P24385 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC14.59□□□□□ -0.07
CCND1P24385 AC012617.1-204ENST00000586340 2305 ntBASIC14.59□□□□□ -0.07
CCND1P24385 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CCND1P24385 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14.59□□□□□ -0.07
CCND1P24385 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CCND1P24385 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCND1P24385 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCND1P24385 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CCND1P24385 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCND1P24385 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCND1P24385 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
CCND1P24385 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCND1P24385 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCND1P24385 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCND1P24385 AL035633.1-201ENST00000406139 838 ntBASIC14.59□□□□□ -0.07
CCND1P24385 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.59□□□□□ -0.07
CCND1P24385 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.59□□□□□ -0.07
CCND1P24385 NME2P1-201ENST00000426182 414 ntBASIC14.59□□□□□ -0.07
CCND1P24385 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.59□□□□□ -0.07
CCND1P24385 AC026434.2-201ENST00000506094 1078 ntBASIC14.59□□□□□ -0.07
CCND1P24385 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.59□□□□□ -0.07
CCND1P24385 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.59□□□□□ -0.07
CCND1P24385 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CCND1P24385 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CCND1P24385 AC145423.3-201ENST00000615987 467 ntBASIC14.59□□□□□ -0.07
CCND1P24385 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.59□□□□□ -0.07
CCND1P24385 AC105233.6-201ENST00000642093 218 ntBASIC14.59□□□□□ -0.07
CCND1P24385 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.59□□□□□ -0.07
CCND1P24385 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCND1P24385 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.59□□□□□ -0.07
CCND1P24385 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.59□□□□□ -0.07
CCND1P24385 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CCND1P24385 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CCND1P24385 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCND1P24385 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCND1P24385 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCND1P24385 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCND1P24385 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCND1P24385 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCND1P24385 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCND1P24385 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCND1P24385 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCND1P24385 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCND1P24385 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCND1P24385 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCND1P24385 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCND1P24385 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC14.59□□□□□ -0.07
CCND1P24385 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
CCND1P24385 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CCND1P24385 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
CCND1P24385 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.58□□□□□ -0.07
CCND1P24385 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.58□□□□□ -0.07
CCND1P24385 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
CCND1P24385 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CCND1P24385 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CCND1P24385 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CCND1P24385 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CCND1P24385 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CCND1P24385 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
CCND1P24385 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCND1P24385 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.58□□□□□ -0.08
CCND1P24385 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCND1P24385 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC14.58□□□□□ -0.08
CCND1P24385 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.58□□□□□ -0.08
CCND1P24385 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CCND1P24385 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CCND1P24385 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.58□□□□□ -0.08
CCND1P24385 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.58□□□□□ -0.08
CCND1P24385 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.58□□□□□ -0.08
CCND1P24385 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCND1P24385 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.58□□□□□ -0.08
CCND1P24385 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.58□□□□□ -0.08
CCND1P24385 C2orf27AP3-201ENST00000434123 579 ntBASIC14.58□□□□□ -0.08
CCND1P24385 AC245100.3-201ENST00000441281 285 ntBASIC14.58□□□□□ -0.08
CCND1P24385 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.58□□□□□ -0.08
CCND1P24385 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.58□□□□□ -0.08
CCND1P24385 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCND1P24385 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CCND1P24385 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms