Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC78A2IDD5 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CCDC78A2IDD5 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC78A2IDD5 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.68□□□□□ -0.06
CCDC78A2IDD5 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.68□□□□□ -0.06
CCDC78A2IDD5 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC78A2IDD5 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.68□□□□□ -0.06
CCDC78A2IDD5 MIR6074-201ENST00000612054 107 ntBASIC14.68□□□□□ -0.06
CCDC78A2IDD5 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC78A2IDD5 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14.68□□□□□ -0.06
CCDC78A2IDD5 AC005014.1-201ENST00000432006 2976 ntBASIC14.68□□□□□ -0.06
CCDC78A2IDD5 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC78A2IDD5 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC14.68□□□□□ -0.06
CCDC78A2IDD5 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC78A2IDD5 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.68□□□□□ -0.06
CCDC78A2IDD5 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
CCDC78A2IDD5 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.68□□□□□ -0.06
CCDC78A2IDD5 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.68□□□□□ -0.06
CCDC78A2IDD5 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC78A2IDD5 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC78A2IDD5 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
CCDC78A2IDD5 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC78A2IDD5 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC78A2IDD5 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.67□□□□□ -0.06
CCDC78A2IDD5 AL023775.1-201ENST00000454907 1746 ntBASIC14.67□□□□□ -0.06
CCDC78A2IDD5 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC78A2IDD5 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.67□□□□□ -0.06
CCDC78A2IDD5 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC78A2IDD5 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC78A2IDD5 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC78A2IDD5 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC78A2IDD5 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CCDC78A2IDD5 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
CCDC78A2IDD5 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CCDC78A2IDD5 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC78A2IDD5 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.67□□□□□ -0.06
CCDC78A2IDD5 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.67□□□□□ -0.06
CCDC78A2IDD5 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.67□□□□□ -0.06
CCDC78A2IDD5 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.67□□□□□ -0.06
CCDC78A2IDD5 AL355994.2-201ENST00000447882 704 ntBASIC14.67□□□□□ -0.06
CCDC78A2IDD5 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.67□□□□□ -0.06
CCDC78A2IDD5 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.67□□□□□ -0.06
CCDC78A2IDD5 AC100850.1-201ENST00000506768 649 ntBASIC14.67□□□□□ -0.06
CCDC78A2IDD5 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.67□□□□□ -0.06
CCDC78A2IDD5 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.67□□□□□ -0.06
CCDC78A2IDD5 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.67□□□□□ -0.06
CCDC78A2IDD5 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.67□□□□□ -0.06
CCDC78A2IDD5 AC027237.1-201ENST00000560942 655 ntBASIC14.67□□□□□ -0.06
CCDC78A2IDD5 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CCDC78A2IDD5 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC78A2IDD5 AC017083.2-201ENST00000608069 979 ntBASIC14.67□□□□□ -0.06
CCDC78A2IDD5 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC78A2IDD5 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC78A2IDD5 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC78A2IDD5 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.67□□□□□ -0.06
CCDC78A2IDD5 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC78A2IDD5 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC78A2IDD5 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CCDC78A2IDD5 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC78A2IDD5 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC78A2IDD5 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC78A2IDD5 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CCDC78A2IDD5 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.67□□□□□ -0.06
CCDC78A2IDD5 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC78A2IDD5 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.66□□□□□ -0.06
CCDC78A2IDD5 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC78A2IDD5 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC78A2IDD5 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CCDC78A2IDD5 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC78A2IDD5 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CCDC78A2IDD5 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CCDC78A2IDD5 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC78A2IDD5 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC78A2IDD5 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC78A2IDD5 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC78A2IDD5 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CCDC78A2IDD5 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC78A2IDD5 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CCDC78A2IDD5 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC78A2IDD5 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC78A2IDD5 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.66□□□□□ -0.06
CCDC78A2IDD5 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.66□□□□□ -0.06
CCDC78A2IDD5 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC78A2IDD5 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC78A2IDD5 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.66□□□□□ -0.06
CCDC78A2IDD5 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CCDC78A2IDD5 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC78A2IDD5 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC78A2IDD5 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC78A2IDD5 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC78A2IDD5 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC78A2IDD5 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC78A2IDD5 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.66□□□□□ -0.06
CCDC78A2IDD5 AC099336.1-201ENST00000417053 1171 ntBASIC14.66□□□□□ -0.06
CCDC78A2IDD5 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.66□□□□□ -0.06
CCDC78A2IDD5 HLA-V-201ENST00000429037 534 ntBASIC14.66□□□□□ -0.06
CCDC78A2IDD5 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.66□□□□□ -0.06
CCDC78A2IDD5 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CCDC78A2IDD5 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC78A2IDD5 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms