Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UPF3BQ9BZI7 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.25■□□□□ 0.35
UPF3BQ9BZI7 GAS5-209ENST00000430245 723 ntTSL 3 BASIC17.25■□□□□ 0.35
UPF3BQ9BZI7 KRT43P-201ENST00000434019 910 ntBASIC17.25■□□□□ 0.35
UPF3BQ9BZI7 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.25■□□□□ 0.35
UPF3BQ9BZI7 AL355994.2-201ENST00000447882 704 ntBASIC17.25■□□□□ 0.35
UPF3BQ9BZI7 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UPF3BQ9BZI7 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC17.25■□□□□ 0.35
UPF3BQ9BZI7 AP000812.2-201ENST00000538934 718 ntBASIC17.25■□□□□ 0.35
UPF3BQ9BZI7 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.25■□□□□ 0.35
UPF3BQ9BZI7 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UPF3BQ9BZI7 RN7SL219P-201ENST00000582872 296 ntBASIC17.25■□□□□ 0.35
UPF3BQ9BZI7 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UPF3BQ9BZI7 MIR4259-201ENST00000584466 101 ntBASIC17.25■□□□□ 0.35
UPF3BQ9BZI7 AC008825.2-201ENST00000603374 718 ntBASIC17.25■□□□□ 0.35
UPF3BQ9BZI7 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.25■□□□□ 0.35
UPF3BQ9BZI7 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UPF3BQ9BZI7 RHOXF1P1-202ENST00000635473 501 ntBASIC17.25■□□□□ 0.35
UPF3BQ9BZI7 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPF3BQ9BZI7 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
UPF3BQ9BZI7 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPF3BQ9BZI7 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPF3BQ9BZI7 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPF3BQ9BZI7 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
UPF3BQ9BZI7 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
UPF3BQ9BZI7 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPF3BQ9BZI7 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPF3BQ9BZI7 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
UPF3BQ9BZI7 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
UPF3BQ9BZI7 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPF3BQ9BZI7 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC17.24■□□□□ 0.35
UPF3BQ9BZI7 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UPF3BQ9BZI7 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
UPF3BQ9BZI7 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UPF3BQ9BZI7 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UPF3BQ9BZI7 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UPF3BQ9BZI7 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UPF3BQ9BZI7 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC17.24■□□□□ 0.35
UPF3BQ9BZI7 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UPF3BQ9BZI7 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
UPF3BQ9BZI7 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UPF3BQ9BZI7 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UPF3BQ9BZI7 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.24■□□□□ 0.35
UPF3BQ9BZI7 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC17.24■□□□□ 0.35
UPF3BQ9BZI7 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.24■□□□□ 0.35
UPF3BQ9BZI7 ACTBP11-201ENST00000436287 1126 ntBASIC17.24■□□□□ 0.35
UPF3BQ9BZI7 SKA2-202ENST00000437036 625 ntTSL 2 BASIC17.24■□□□□ 0.35
UPF3BQ9BZI7 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.24■□□□□ 0.35
UPF3BQ9BZI7 RPL7P3-201ENST00000441388 714 ntBASIC17.24■□□□□ 0.35
UPF3BQ9BZI7 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UPF3BQ9BZI7 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
UPF3BQ9BZI7 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
UPF3BQ9BZI7 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.24■□□□□ 0.35
UPF3BQ9BZI7 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.24■□□□□ 0.35
UPF3BQ9BZI7 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.24■□□□□ 0.35
UPF3BQ9BZI7 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.24■□□□□ 0.35
UPF3BQ9BZI7 MIR4783-201ENST00000580343 82 ntBASIC17.24■□□□□ 0.35
UPF3BQ9BZI7 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.24■□□□□ 0.35
UPF3BQ9BZI7 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.24■□□□□ 0.35
UPF3BQ9BZI7 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC17.24■□□□□ 0.35
UPF3BQ9BZI7 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
UPF3BQ9BZI7 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC17.24■□□□□ 0.35
UPF3BQ9BZI7 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UPF3BQ9BZI7 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UPF3BQ9BZI7 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UPF3BQ9BZI7 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC17.24■□□□□ 0.35
UPF3BQ9BZI7 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC17.24■□□□□ 0.35
UPF3BQ9BZI7 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UPF3BQ9BZI7 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
UPF3BQ9BZI7 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UPF3BQ9BZI7 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPF3BQ9BZI7 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UPF3BQ9BZI7 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPF3BQ9BZI7 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC17.23■□□□□ 0.35
UPF3BQ9BZI7 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UPF3BQ9BZI7 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPF3BQ9BZI7 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPF3BQ9BZI7 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
UPF3BQ9BZI7 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
UPF3BQ9BZI7 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC17.23■□□□□ 0.35
UPF3BQ9BZI7 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
UPF3BQ9BZI7 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPF3BQ9BZI7 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.23■□□□□ 0.35
UPF3BQ9BZI7 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.23■□□□□ 0.35
UPF3BQ9BZI7 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UPF3BQ9BZI7 AL645933.1-201ENST00000440087 609 ntBASIC17.23■□□□□ 0.35
UPF3BQ9BZI7 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.23■□□□□ 0.35
UPF3BQ9BZI7 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.23■□□□□ 0.35
UPF3BQ9BZI7 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.23■□□□□ 0.35
UPF3BQ9BZI7 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UPF3BQ9BZI7 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.23■□□□□ 0.35
UPF3BQ9BZI7 MIR4538-201ENST00000581377 78 ntBASIC17.23■□□□□ 0.35
UPF3BQ9BZI7 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.23■□□□□ 0.35
UPF3BQ9BZI7 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.23■□□□□ 0.35
UPF3BQ9BZI7 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.23■□□□□ 0.35
UPF3BQ9BZI7 AC132192.2-201ENST00000596206 1147 ntBASIC17.23■□□□□ 0.35
UPF3BQ9BZI7 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.23■□□□□ 0.35
UPF3BQ9BZI7 RETN-203ENST00000629642 400 ntTSL 5 BASIC17.23■□□□□ 0.35
UPF3BQ9BZI7 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
UPF3BQ9BZI7 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms