Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 SAT1-203ENST00000379254 868 ntTSL 3 BASIC14.42□□□□□ -0.1
HMGB4Q8WW32 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGB4Q8WW32 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC14.42□□□□□ -0.1
HMGB4Q8WW32 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HMGB4Q8WW32 ALG1L6P-201ENST00000515248 758 ntBASIC14.42□□□□□ -0.1
HMGB4Q8WW32 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC14.42□□□□□ -0.1
HMGB4Q8WW32 AC005586.2-201ENST00000563946 837 ntBASIC14.42□□□□□ -0.1
HMGB4Q8WW32 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC14.42□□□□□ -0.1
HMGB4Q8WW32 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC14.42□□□□□ -0.1
HMGB4Q8WW32 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.42□□□□□ -0.1
HMGB4Q8WW32 AC009145.4-201ENST00000625119 1294 ntBASIC14.42□□□□□ -0.1
HMGB4Q8WW32 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGB4Q8WW32 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC14.42□□□□□ -0.1
HMGB4Q8WW32 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
HMGB4Q8WW32 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGB4Q8WW32 OR2I1P-209ENST00000641730 5365 ntBASIC14.42□□□□□ -0.1
HMGB4Q8WW32 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGB4Q8WW32 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGB4Q8WW32 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HMGB4Q8WW32 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.42□□□□□ -0.1
HMGB4Q8WW32 AL591122.2-201ENST00000624125 1853 ntBASIC14.42□□□□□ -0.1
HMGB4Q8WW32 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGB4Q8WW32 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
HMGB4Q8WW32 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
HMGB4Q8WW32 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 RN7SL665P-201ENST00000578793 300 ntBASIC14.41□□□□□ -0.1
HMGB4Q8WW32 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 MIR2392-201ENST00000584881 84 ntBASIC14.41□□□□□ -0.1
HMGB4Q8WW32 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 FTX-216ENST00000638985 1367 ntTSL 5 BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGB4Q8WW32 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMGB4Q8WW32 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.4□□□□□ -0.1
HMGB4Q8WW32 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HMGB4Q8WW32 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HMGB4Q8WW32 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGB4Q8WW32 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGB4Q8WW32 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGB4Q8WW32 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMGB4Q8WW32 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGB4Q8WW32 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGB4Q8WW32 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGB4Q8WW32 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.4□□□□□ -0.1
HMGB4Q8WW32 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC14.4□□□□□ -0.1
HMGB4Q8WW32 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.4□□□□□ -0.1
HMGB4Q8WW32 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGB4Q8WW32 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMGB4Q8WW32 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.4□□□□□ -0.1
HMGB4Q8WW32 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGB4Q8WW32 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGB4Q8WW32 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.4□□□□□ -0.1
HMGB4Q8WW32 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGB4Q8WW32 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGB4Q8WW32 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGB4Q8WW32 PYY2-201ENST00000315776 282 ntBASIC14.4□□□□□ -0.1
HMGB4Q8WW32 AL357563.1-201ENST00000404728 395 ntBASIC14.4□□□□□ -0.1
HMGB4Q8WW32 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMGB4Q8WW32 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC14.4□□□□□ -0.1
HMGB4Q8WW32 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms