Protein–RNA interactions for Protein: Q8IV77

CNGA4, Cyclic nucleotide-gated cation channel alpha-4, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA4Q8IV77 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC15.71■□□□□ 0.1
CNGA4Q8IV77 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CNGA4Q8IV77 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
CNGA4Q8IV77 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
CNGA4Q8IV77 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CNGA4Q8IV77 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC15.71■□□□□ 0.1
CNGA4Q8IV77 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.1
CNGA4Q8IV77 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC15.7■□□□□ 0.1
CNGA4Q8IV77 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CNGA4Q8IV77 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CNGA4Q8IV77 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CNGA4Q8IV77 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNGA4Q8IV77 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNGA4Q8IV77 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNGA4Q8IV77 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CNGA4Q8IV77 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNGA4Q8IV77 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNGA4Q8IV77 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CNGA4Q8IV77 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC15.7■□□□□ 0.1
CNGA4Q8IV77 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC15.7■□□□□ 0.1
CNGA4Q8IV77 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNGA4Q8IV77 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNGA4Q8IV77 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC15.7■□□□□ 0.1
CNGA4Q8IV77 AL359845.1-201ENST00000458202 1648 ntBASIC15.7■□□□□ 0.1
CNGA4Q8IV77 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNGA4Q8IV77 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNGA4Q8IV77 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
CNGA4Q8IV77 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CNGA4Q8IV77 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CNGA4Q8IV77 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.7■□□□□ 0.1
CNGA4Q8IV77 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNGA4Q8IV77 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.7■□□□□ 0.1
CNGA4Q8IV77 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.7■□□□□ 0.1
CNGA4Q8IV77 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.7■□□□□ 0.1
CNGA4Q8IV77 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CNGA4Q8IV77 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.7■□□□□ 0.1
CNGA4Q8IV77 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CNGA4Q8IV77 AL132655.2-201ENST00000596276 594 ntBASIC15.7■□□□□ 0.1
CNGA4Q8IV77 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNGA4Q8IV77 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNGA4Q8IV77 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNGA4Q8IV77 MKRN5P-201ENST00000445263 1467 ntBASIC15.7■□□□□ 0.1
CNGA4Q8IV77 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNGA4Q8IV77 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CNGA4Q8IV77 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CNGA4Q8IV77 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC15.7■□□□□ 0.1
CNGA4Q8IV77 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNGA4Q8IV77 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC15.7■□□□□ 0.1
CNGA4Q8IV77 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.7■□□□□ 0.1
CNGA4Q8IV77 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC15.7■□□□□ 0.1
CNGA4Q8IV77 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
CNGA4Q8IV77 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CNGA4Q8IV77 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CNGA4Q8IV77 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CNGA4Q8IV77 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.69■□□□□ 0.1
CNGA4Q8IV77 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.69■□□□□ 0.1
CNGA4Q8IV77 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNGA4Q8IV77 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CNGA4Q8IV77 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CNGA4Q8IV77 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
CNGA4Q8IV77 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CNGA4Q8IV77 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNGA4Q8IV77 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CNGA4Q8IV77 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNGA4Q8IV77 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CNGA4Q8IV77 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CNGA4Q8IV77 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNGA4Q8IV77 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CNGA4Q8IV77 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.69■□□□□ 0.1
CNGA4Q8IV77 AC136604.1-202ENST00000425471 771 ntBASIC15.69■□□□□ 0.1
CNGA4Q8IV77 AC012441.1-201ENST00000446669 685 ntBASIC15.69■□□□□ 0.1
CNGA4Q8IV77 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.69■□□□□ 0.1
CNGA4Q8IV77 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.69■□□□□ 0.1
CNGA4Q8IV77 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.69■□□□□ 0.1
CNGA4Q8IV77 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.69■□□□□ 0.1
CNGA4Q8IV77 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.69■□□□□ 0.1
CNGA4Q8IV77 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.69■□□□□ 0.1
CNGA4Q8IV77 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CNGA4Q8IV77 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CNGA4Q8IV77 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC15.69■□□□□ 0.1
CNGA4Q8IV77 BEND3P3-201ENST00000611030 2440 ntBASIC15.69■□□□□ 0.1
CNGA4Q8IV77 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CNGA4Q8IV77 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CNGA4Q8IV77 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNGA4Q8IV77 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
CNGA4Q8IV77 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CNGA4Q8IV77 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNGA4Q8IV77 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CNGA4Q8IV77 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CNGA4Q8IV77 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNGA4Q8IV77 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CNGA4Q8IV77 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CNGA4Q8IV77 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CNGA4Q8IV77 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CNGA4Q8IV77 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CNGA4Q8IV77 MSTO2P-201ENST00000314835 1709 ntBASIC15.68■□□□□ 0.1
CNGA4Q8IV77 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CNGA4Q8IV77 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNGA4Q8IV77 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CNGA4Q8IV77 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 222.8 ms