Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC12.95□□□□□ -0.34
VBP1P61758 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VBP1P61758 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
VBP1P61758 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VBP1P61758 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC12.95□□□□□ -0.34
VBP1P61758 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
VBP1P61758 TIMM8BP1-201ENST00000452384 211 ntBASIC12.95□□□□□ -0.34
VBP1P61758 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
VBP1P61758 ALG1L8P-201ENST00000533887 760 ntBASIC12.95□□□□□ -0.34
VBP1P61758 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
VBP1P61758 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.95□□□□□ -0.34
VBP1P61758 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
VBP1P61758 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC12.95□□□□□ -0.34
VBP1P61758 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC12.95□□□□□ -0.34
VBP1P61758 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC12.95□□□□□ -0.34
VBP1P61758 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
VBP1P61758 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
VBP1P61758 AC055717.3-201ENST00000622967 595 ntBASIC12.95□□□□□ -0.34
VBP1P61758 AC012313.10-201ENST00000623509 926 ntBASIC12.95□□□□□ -0.34
VBP1P61758 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.95□□□□□ -0.34
VBP1P61758 AC004840.1-201ENST00000636359 365 ntBASIC12.95□□□□□ -0.34
VBP1P61758 AL033527.5-202ENST00000641632 1098 ntBASIC12.95□□□□□ -0.34
VBP1P61758 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VBP1P61758 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.95□□□□□ -0.34
VBP1P61758 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VBP1P61758 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VBP1P61758 AC092117.1-201ENST00000621230 3250 ntBASIC12.95□□□□□ -0.34
VBP1P61758 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
VBP1P61758 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VBP1P61758 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC12.95□□□□□ -0.34
VBP1P61758 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VBP1P61758 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
VBP1P61758 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
VBP1P61758 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
VBP1P61758 DDX12P-201ENST00000432996 2947 ntBASIC12.95□□□□□ -0.34
VBP1P61758 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VBP1P61758 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VBP1P61758 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC12.95□□□□□ -0.34
VBP1P61758 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
VBP1P61758 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
VBP1P61758 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VBP1P61758 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VBP1P61758 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VBP1P61758 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
VBP1P61758 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VBP1P61758 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
VBP1P61758 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
VBP1P61758 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VBP1P61758 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VBP1P61758 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VBP1P61758 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC12.94□□□□□ -0.34
VBP1P61758 LINC00638-201ENST00000555578 2518 ntBASIC12.94□□□□□ -0.34
VBP1P61758 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VBP1P61758 NPTN-IT1-201ENST00000628401 2283 ntBASIC12.94□□□□□ -0.34
VBP1P61758 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VBP1P61758 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.94□□□□□ -0.34
VBP1P61758 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VBP1P61758 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VBP1P61758 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VBP1P61758 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VBP1P61758 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
VBP1P61758 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VBP1P61758 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
VBP1P61758 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VBP1P61758 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VBP1P61758 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC12.94□□□□□ -0.34
VBP1P61758 TLE1P1-201ENST00000422965 589 ntBASIC12.94□□□□□ -0.34
VBP1P61758 FAM58CP-201ENST00000435741 640 ntBASIC12.94□□□□□ -0.34
VBP1P61758 AL592309.1-201ENST00000443127 649 ntBASIC12.94□□□□□ -0.34
VBP1P61758 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC12.94□□□□□ -0.34
VBP1P61758 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VBP1P61758 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC12.94□□□□□ -0.34
VBP1P61758 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC12.94□□□□□ -0.34
VBP1P61758 AC093909.1-201ENST00000504731 1122 ntBASIC12.94□□□□□ -0.34
VBP1P61758 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC12.94□□□□□ -0.34
VBP1P61758 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.94□□□□□ -0.34
VBP1P61758 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
VBP1P61758 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VBP1P61758 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.94□□□□□ -0.34
VBP1P61758 AC103988.2-201ENST00000561804 725 ntBASIC12.94□□□□□ -0.34
VBP1P61758 DUX4L47-201ENST00000566374 394 ntBASIC12.94□□□□□ -0.34
VBP1P61758 RMI2-205ENST00000576027 818 ntTSL 2 BASIC12.94□□□□□ -0.34
VBP1P61758 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VBP1P61758 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC12.94□□□□□ -0.34
VBP1P61758 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC12.94□□□□□ -0.34
VBP1P61758 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VBP1P61758 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VBP1P61758 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VBP1P61758 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC12.94□□□□□ -0.34
VBP1P61758 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC12.94□□□□□ -0.34
VBP1P61758 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
VBP1P61758 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VBP1P61758 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
VBP1P61758 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VBP1P61758 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
VBP1P61758 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VBP1P61758 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
VBP1P61758 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VBP1P61758 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VBP1P61758 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms