Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC34P49427 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC34P49427 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC11.47□□□□□ -0.57
CDC34P49427 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC34P49427 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC34P49427 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
CDC34P49427 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC11.47□□□□□ -0.57
CDC34P49427 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC11.47□□□□□ -0.57
CDC34P49427 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC34P49427 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC11.47□□□□□ -0.57
CDC34P49427 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC34P49427 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC34P49427 RHPN1-AS1-201ENST00000518049 1918 ntBASIC11.47□□□□□ -0.57
CDC34P49427 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC34P49427 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CDC34P49427 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CDC34P49427 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CDC34P49427 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
CDC34P49427 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CDC34P49427 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
CDC34P49427 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
CDC34P49427 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
CDC34P49427 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC11.46□□□□□ -0.57
CDC34P49427 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
CDC34P49427 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CDC34P49427 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CDC34P49427 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
CDC34P49427 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC11.46□□□□□ -0.57
CDC34P49427 AGAP12P-201ENST00000585227 2359 ntBASIC11.46□□□□□ -0.57
CDC34P49427 AC021752.1-202ENST00000613161 2398 ntTSL 2 BASIC11.46□□□□□ -0.57
CDC34P49427 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CDC34P49427 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CDC34P49427 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CDC34P49427 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
CDC34P49427 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC11.46□□□□□ -0.57
CDC34P49427 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC11.46□□□□□ -0.57
CDC34P49427 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CDC34P49427 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CDC34P49427 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CDC34P49427 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
CDC34P49427 BRF1-202ENST00000379932 884 ntTSL 5 BASIC11.46□□□□□ -0.57
CDC34P49427 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CDC34P49427 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CDC34P49427 CENPM-205ENST00000404067 905 ntTSL 3 BASIC11.46□□□□□ -0.57
CDC34P49427 CENPM-206ENST00000407253 818 ntTSL 2 BASIC11.46□□□□□ -0.57
CDC34P49427 AL450487.1-201ENST00000426799 995 ntBASIC11.46□□□□□ -0.57
CDC34P49427 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC11.46□□□□□ -0.57
CDC34P49427 CEND1P1-201ENST00000451006 455 ntBASIC11.46□□□□□ -0.57
CDC34P49427 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC11.46□□□□□ -0.57
CDC34P49427 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC11.46□□□□□ -0.57
CDC34P49427 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC11.46□□□□□ -0.57
CDC34P49427 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC11.46□□□□□ -0.57
CDC34P49427 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CDC34P49427 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC11.46□□□□□ -0.57
CDC34P49427 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC11.46□□□□□ -0.57
CDC34P49427 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
CDC34P49427 AL603764.1-201ENST00000636452 321 ntBASIC11.46□□□□□ -0.57
CDC34P49427 AP000437.1-201ENST00000624057 2085 ntBASIC11.46□□□□□ -0.57
CDC34P49427 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC11.46□□□□□ -0.57
CDC34P49427 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CDC34P49427 AMT-221ENST00000538581 2038 ntTSL 2 BASIC11.46□□□□□ -0.57
CDC34P49427 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC11.46□□□□□ -0.58
CDC34P49427 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CDC34P49427 ELL2P1-201ENST00000413990 1906 ntBASIC11.46□□□□□ -0.58
CDC34P49427 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
CDC34P49427 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
CDC34P49427 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CDC34P49427 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
CDC34P49427 MATR3-227ENST00000618441 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CDC34P49427 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
CDC34P49427 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
CDC34P49427 SLC5A11-202ENST00000424767 2399 ntTSL 2 BASIC11.46□□□□□ -0.58
CDC34P49427 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CDC34P49427 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
CDC34P49427 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC11.46□□□□□ -0.58
CDC34P49427 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
CDC34P49427 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
CDC34P49427 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC11.46□□□□□ -0.58
CDC34P49427 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC11.45□□□□□ -0.58
CDC34P49427 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC34P49427 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC34P49427 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
CDC34P49427 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
CDC34P49427 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CDC34P49427 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC34P49427 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
CDC34P49427 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
CDC34P49427 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC34P49427 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CDC34P49427 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC11.45□□□□□ -0.58
CDC34P49427 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC11.45□□□□□ -0.58
CDC34P49427 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC34P49427 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC34P49427 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC34P49427 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC11.45□□□□□ -0.58
CDC34P49427 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC34P49427 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC11.45□□□□□ -0.58
CDC34P49427 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC34P49427 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC11.45□□□□□ -0.58
CDC34P49427 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms