Protein–RNA interactions for Protein: P30532

CHRNA5, Neuronal acetylcholine receptor subunit alpha-5, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5P30532 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC17.34■□□□□ 0.37
CHRNA5P30532 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA5P30532 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.34■□□□□ 0.37
CHRNA5P30532 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.34■□□□□ 0.37
CHRNA5P30532 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA5P30532 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA5P30532 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA5P30532 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.34■□□□□ 0.37
CHRNA5P30532 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.34■□□□□ 0.37
CHRNA5P30532 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA5P30532 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.33■□□□□ 0.37
CHRNA5P30532 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
CHRNA5P30532 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHRNA5P30532 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC17.33■□□□□ 0.37
CHRNA5P30532 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
CHRNA5P30532 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHRNA5P30532 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHRNA5P30532 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CHRNA5P30532 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC17.33■□□□□ 0.37
CHRNA5P30532 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHRNA5P30532 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CHRNA5P30532 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC17.33■□□□□ 0.37
CHRNA5P30532 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHRNA5P30532 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHRNA5P30532 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CHRNA5P30532 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHRNA5P30532 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CHRNA5P30532 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHRNA5P30532 ACTBP14-201ENST00000411655 1089 ntBASIC17.33■□□□□ 0.36
CHRNA5P30532 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC17.33■□□□□ 0.36
CHRNA5P30532 AC092810.2-201ENST00000431570 362 ntBASIC17.33■□□□□ 0.36
CHRNA5P30532 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC17.33■□□□□ 0.36
CHRNA5P30532 RPSAP12-201ENST00000435879 888 ntBASIC17.33■□□□□ 0.36
CHRNA5P30532 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHRNA5P30532 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC17.33■□□□□ 0.36
CHRNA5P30532 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC17.33■□□□□ 0.36
CHRNA5P30532 RN7SL524P-201ENST00000581152 300 ntBASIC17.33■□□□□ 0.36
CHRNA5P30532 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC17.33■□□□□ 0.36
CHRNA5P30532 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHRNA5P30532 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CHRNA5P30532 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHRNA5P30532 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHRNA5P30532 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC17.33■□□□□ 0.36
CHRNA5P30532 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CHRNA5P30532 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.36
CHRNA5P30532 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHRNA5P30532 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHRNA5P30532 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHRNA5P30532 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHRNA5P30532 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHRNA5P30532 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA5P30532 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA5P30532 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC17.32■□□□□ 0.36
CHRNA5P30532 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC17.32■□□□□ 0.36
CHRNA5P30532 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA5P30532 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA5P30532 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
CHRNA5P30532 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CHRNA5P30532 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CHRNA5P30532 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA5P30532 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA5P30532 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA5P30532 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA5P30532 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CHRNA5P30532 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA5P30532 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA5P30532 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC17.32■□□□□ 0.36
CHRNA5P30532 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA5P30532 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA5P30532 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CHRNA5P30532 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA5P30532 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA5P30532 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CHRNA5P30532 RPL14-203ENST00000416518 812 ntTSL 3 BASIC17.32■□□□□ 0.36
CHRNA5P30532 AC103563.1-201ENST00000429316 123 ntBASIC17.32■□□□□ 0.36
CHRNA5P30532 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC17.32■□□□□ 0.36
CHRNA5P30532 AL136084.1-201ENST00000449172 318 ntBASIC17.32■□□□□ 0.36
CHRNA5P30532 AC010900.1-201ENST00000449849 1296 ntBASIC17.32■□□□□ 0.36
CHRNA5P30532 GOLGA2P8-201ENST00000505201 779 ntBASIC17.32■□□□□ 0.36
CHRNA5P30532 MBP-230ENST00000528160 584 ntTSL 5 BASIC17.32■□□□□ 0.36
CHRNA5P30532 URB1-AS1-201ENST00000534991 831 ntBASIC17.32■□□□□ 0.36
CHRNA5P30532 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC17.32■□□□□ 0.36
CHRNA5P30532 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC17.32■□□□□ 0.36
CHRNA5P30532 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC17.32■□□□□ 0.36
CHRNA5P30532 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC17.32■□□□□ 0.36
CHRNA5P30532 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA5P30532 KF455155.1-201ENST00000604493 303 ntBASIC17.32■□□□□ 0.36
CHRNA5P30532 AC020904.3-201ENST00000624199 442 ntBASIC17.32■□□□□ 0.36
CHRNA5P30532 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CHRNA5P30532 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA5P30532 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.32■□□□□ 0.36
CHRNA5P30532 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA5P30532 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA5P30532 PPT1-215ENST00000641471 2368 ntBASIC17.32■□□□□ 0.36
CHRNA5P30532 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.32■□□□□ 0.36
CHRNA5P30532 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.32■□□□□ 0.36
CHRNA5P30532 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA5P30532 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA5P30532 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA5P30532 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms