Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC023310.1-201ENST00000554836 735 ntBASIC14.56□□□□□ -0.08
GPC4O75487 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.56□□□□□ -0.08
GPC4O75487 AP005482.1-201ENST00000563722 1273 ntBASIC14.56□□□□□ -0.08
GPC4O75487 MIR4683-201ENST00000579659 81 ntBASIC14.56□□□□□ -0.08
GPC4O75487 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.56□□□□□ -0.08
GPC4O75487 ZACNP1-201ENST00000612259 710 ntBASIC14.56□□□□□ -0.08
GPC4O75487 AC002472.3-201ENST00000640124 621 ntBASIC14.56□□□□□ -0.08
GPC4O75487 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GPC4O75487 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.56□□□□□ -0.08
GPC4O75487 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GPC4O75487 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GPC4O75487 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
GPC4O75487 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GPC4O75487 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GPC4O75487 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.56□□□□□ -0.08
GPC4O75487 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GPC4O75487 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
GPC4O75487 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GPC4O75487 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GPC4O75487 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
GPC4O75487 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
GPC4O75487 AC005252.3-201ENST00000623855 2258 ntBASIC14.55□□□□□ -0.08
GPC4O75487 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GPC4O75487 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GPC4O75487 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.55□□□□□ -0.08
GPC4O75487 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
GPC4O75487 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.55□□□□□ -0.08
GPC4O75487 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GPC4O75487 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GPC4O75487 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GPC4O75487 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GPC4O75487 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GPC4O75487 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GPC4O75487 OR8S1-201ENST00000310194 1080 ntBASIC14.55□□□□□ -0.08
GPC4O75487 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GPC4O75487 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GPC4O75487 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.55□□□□□ -0.08
GPC4O75487 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GPC4O75487 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
GPC4O75487 AC099336.1-201ENST00000417053 1171 ntBASIC14.55□□□□□ -0.08
GPC4O75487 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.55□□□□□ -0.08
GPC4O75487 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.55□□□□□ -0.08
GPC4O75487 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
GPC4O75487 CSF2RBP1-201ENST00000447905 391 ntBASIC14.55□□□□□ -0.08
GPC4O75487 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.55□□□□□ -0.08
GPC4O75487 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
GPC4O75487 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.55□□□□□ -0.08
GPC4O75487 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.55□□□□□ -0.08
GPC4O75487 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.55□□□□□ -0.08
GPC4O75487 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
GPC4O75487 AC089987.1-201ENST00000551654 2209 ntBASIC14.55□□□□□ -0.08
GPC4O75487 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.55□□□□□ -0.08
GPC4O75487 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.55□□□□□ -0.08
GPC4O75487 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GPC4O75487 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
GPC4O75487 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GPC4O75487 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GPC4O75487 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
GPC4O75487 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GPC4O75487 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.55□□□□□ -0.08
GPC4O75487 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
GPC4O75487 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GPC4O75487 AC016397.2-201ENST00000624848 1985 ntBASIC14.54□□□□□ -0.08
GPC4O75487 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GPC4O75487 TP73-201ENST00000346387 4854 ntTSL 5 BASIC14.54□□□□□ -0.08
GPC4O75487 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GPC4O75487 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GPC4O75487 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
GPC4O75487 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC14.54□□□□□ -0.08
GPC4O75487 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
GPC4O75487 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
GPC4O75487 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
GPC4O75487 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GPC4O75487 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GPC4O75487 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
GPC4O75487 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.54□□□□□ -0.08
GPC4O75487 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GPC4O75487 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GPC4O75487 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GPC4O75487 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GPC4O75487 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
GPC4O75487 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
GPC4O75487 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GPC4O75487 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GPC4O75487 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.54□□□□□ -0.08
GPC4O75487 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.54□□□□□ -0.08
GPC4O75487 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.54□□□□□ -0.08
GPC4O75487 PUDPP3-201ENST00000445368 636 ntBASIC14.54□□□□□ -0.08
GPC4O75487 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GPC4O75487 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.54□□□□□ -0.08
GPC4O75487 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.54□□□□□ -0.08
GPC4O75487 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.54□□□□□ -0.08
GPC4O75487 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.54□□□□□ -0.08
GPC4O75487 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GPC4O75487 AC103988.2-201ENST00000561804 725 ntBASIC14.54□□□□□ -0.08
GPC4O75487 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.54□□□□□ -0.08
GPC4O75487 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
GPC4O75487 MIR4259-201ENST00000584466 101 ntBASIC14.54□□□□□ -0.08
GPC4O75487 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.54□□□□□ -0.08
GPC4O75487 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms