Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
PAX4O43316 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
PAX4O43316 AC006001.1-201ENST00000325130 474 ntBASIC10.44□□□□□ -0.74
PAX4O43316 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
PAX4O43316 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC10.44□□□□□ -0.74
PAX4O43316 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC10.44□□□□□ -0.74
PAX4O43316 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
PAX4O43316 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
PAX4O43316 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC10.44□□□□□ -0.74
PAX4O43316 AL513283.1-201ENST00000441790 1087 ntTSL 5 BASIC10.44□□□□□ -0.74
PAX4O43316 AC007919.2-201ENST00000444110 511 ntBASIC10.44□□□□□ -0.74
PAX4O43316 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
PAX4O43316 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC10.44□□□□□ -0.74
PAX4O43316 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC10.44□□□□□ -0.74
PAX4O43316 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC10.44□□□□□ -0.74
PAX4O43316 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
PAX4O43316 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC10.44□□□□□ -0.74
PAX4O43316 AC022447.6-201ENST00000515522 438 ntBASIC10.44□□□□□ -0.74
PAX4O43316 RNF139-AS1-202ENST00000519861 359 ntTSL 3 BASIC10.44□□□□□ -0.74
PAX4O43316 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC10.44□□□□□ -0.74
PAX4O43316 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC10.44□□□□□ -0.74
PAX4O43316 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
PAX4O43316 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
PAX4O43316 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC10.44□□□□□ -0.74
PAX4O43316 AC131206.1-201ENST00000538078 1211 ntBASIC10.44□□□□□ -0.74
PAX4O43316 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC10.44□□□□□ -0.74
PAX4O43316 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC10.44□□□□□ -0.74
PAX4O43316 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC10.44□□□□□ -0.74
PAX4O43316 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
PAX4O43316 RPS24-214ENST00000613865 538 ntTSL 5 BASIC10.44□□□□□ -0.74
PAX4O43316 AC002472.3-201ENST00000640124 621 ntBASIC10.44□□□□□ -0.74
PAX4O43316 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
PAX4O43316 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
PAX4O43316 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
PAX4O43316 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
PAX4O43316 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
PAX4O43316 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
PAX4O43316 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
PAX4O43316 APPBP2-201ENST00000083182 6478 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
PAX4O43316 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
PAX4O43316 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
PAX4O43316 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
PAX4O43316 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC10.44□□□□□ -0.74
PAX4O43316 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
PAX4O43316 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
PAX4O43316 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC10.44□□□□□ -0.74
PAX4O43316 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
PAX4O43316 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
PAX4O43316 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
PAX4O43316 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
PAX4O43316 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
PAX4O43316 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
PAX4O43316 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC10.43□□□□□ -0.74
PAX4O43316 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC10.43□□□□□ -0.74
PAX4O43316 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC10.43□□□□□ -0.74
PAX4O43316 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
PAX4O43316 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
PAX4O43316 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
PAX4O43316 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
PAX4O43316 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
PAX4O43316 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
PAX4O43316 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC10.43□□□□□ -0.74
PAX4O43316 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC10.43□□□□□ -0.74
PAX4O43316 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
PAX4O43316 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
PAX4O43316 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC10.43□□□□□ -0.74
PAX4O43316 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
PAX4O43316 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
PAX4O43316 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC10.43□□□□□ -0.74
PAX4O43316 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
PAX4O43316 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
PAX4O43316 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
PAX4O43316 MEX3B-202ENST00000558133 4333 ntBASIC10.43□□□□□ -0.74
PAX4O43316 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
PAX4O43316 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC10.43□□□□□ -0.74
PAX4O43316 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
PAX4O43316 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
PAX4O43316 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
PAX4O43316 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
PAX4O43316 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
PAX4O43316 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
PAX4O43316 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC10.43□□□□□ -0.74
PAX4O43316 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
PAX4O43316 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
PAX4O43316 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
PAX4O43316 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC10.43□□□□□ -0.74
PAX4O43316 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
PAX4O43316 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC10.43□□□□□ -0.74
PAX4O43316 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC10.43□□□□□ -0.74
PAX4O43316 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
PAX4O43316 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
PAX4O43316 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
PAX4O43316 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
PAX4O43316 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
PAX4O43316 RN7SKP230-201ENST00000365642 335 ntBASIC10.43□□□□□ -0.74
PAX4O43316 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
PAX4O43316 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
PAX4O43316 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
PAX4O43316 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
PAX4O43316 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms