Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NPIPB4C9JG80 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
NPIPB4C9JG80 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NPIPB4C9JG80 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.71□□□□□ -0.37
NPIPB4C9JG80 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.71□□□□□ -0.37
NPIPB4C9JG80 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NPIPB4C9JG80 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.37
NPIPB4C9JG80 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
NPIPB4C9JG80 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
NPIPB4C9JG80 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
NPIPB4C9JG80 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC12.71□□□□□ -0.37
NPIPB4C9JG80 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NPIPB4C9JG80 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
NPIPB4C9JG80 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.71□□□□□ -0.37
NPIPB4C9JG80 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC12.71□□□□□ -0.37
NPIPB4C9JG80 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NPIPB4C9JG80 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
NPIPB4C9JG80 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NPIPB4C9JG80 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC12.71□□□□□ -0.37
NPIPB4C9JG80 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NPIPB4C9JG80 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
NPIPB4C9JG80 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NPIPB4C9JG80 RPS3-201ENST00000278572 907 ntTSL 3 BASIC12.71□□□□□ -0.37
NPIPB4C9JG80 OR8S1-201ENST00000310194 1080 ntBASIC12.71□□□□□ -0.37
NPIPB4C9JG80 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NPIPB4C9JG80 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC12.71□□□□□ -0.37
NPIPB4C9JG80 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC12.71□□□□□ -0.37
NPIPB4C9JG80 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
NPIPB4C9JG80 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC12.71□□□□□ -0.37
NPIPB4C9JG80 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC12.71□□□□□ -0.37
NPIPB4C9JG80 AC011742.3-201ENST00000439053 820 ntBASIC12.71□□□□□ -0.37
NPIPB4C9JG80 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC12.71□□□□□ -0.37
NPIPB4C9JG80 RNMTL1P1-201ENST00000454103 560 ntBASIC12.71□□□□□ -0.37
NPIPB4C9JG80 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC12.71□□□□□ -0.37
NPIPB4C9JG80 RPL13AP20-201ENST00000459725 609 ntBASIC12.71□□□□□ -0.37
NPIPB4C9JG80 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
NPIPB4C9JG80 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC12.71□□□□□ -0.37
NPIPB4C9JG80 FAM8A2P-201ENST00000528813 1142 ntBASIC12.71□□□□□ -0.37
NPIPB4C9JG80 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC12.71□□□□□ -0.37
NPIPB4C9JG80 AC009779.1-201ENST00000551138 283 ntBASIC12.71□□□□□ -0.37
NPIPB4C9JG80 AL583810.1-201ENST00000553344 1045 ntBASIC12.71□□□□□ -0.37
NPIPB4C9JG80 SNORD3B-2-202ENST00000571722 791 ntBASIC12.71□□□□□ -0.37
NPIPB4C9JG80 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC12.71□□□□□ -0.37
NPIPB4C9JG80 MIR3188-201ENST00000583494 85 ntBASIC12.71□□□□□ -0.37
NPIPB4C9JG80 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC12.71□□□□□ -0.37
NPIPB4C9JG80 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC12.71□□□□□ -0.37
NPIPB4C9JG80 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NPIPB4C9JG80 AC090164.2-201ENST00000611487 516 ntBASIC12.71□□□□□ -0.37
NPIPB4C9JG80 AC005695.3-201ENST00000614522 232 ntBASIC12.71□□□□□ -0.37
NPIPB4C9JG80 AC089987.1-201ENST00000551654 2209 ntBASIC12.71□□□□□ -0.37
NPIPB4C9JG80 AL928654.5-201ENST00000624831 2501 ntBASIC12.71□□□□□ -0.37
NPIPB4C9JG80 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.71□□□□□ -0.37
NPIPB4C9JG80 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.71□□□□□ -0.37
NPIPB4C9JG80 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
NPIPB4C9JG80 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
NPIPB4C9JG80 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NPIPB4C9JG80 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
NPIPB4C9JG80 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
NPIPB4C9JG80 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
NPIPB4C9JG80 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
NPIPB4C9JG80 FAM90A12P-201ENST00000519497 2375 ntBASIC12.71□□□□□ -0.38
NPIPB4C9JG80 FAM90A24P-201ENST00000520792 2369 ntBASIC12.71□□□□□ -0.38
NPIPB4C9JG80 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NPIPB4C9JG80 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
NPIPB4C9JG80 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
NPIPB4C9JG80 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.38
NPIPB4C9JG80 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NPIPB4C9JG80 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
NPIPB4C9JG80 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NPIPB4C9JG80 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.7□□□□□ -0.38
NPIPB4C9JG80 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
NPIPB4C9JG80 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NPIPB4C9JG80 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
NPIPB4C9JG80 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NPIPB4C9JG80 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.7□□□□□ -0.38
NPIPB4C9JG80 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
NPIPB4C9JG80 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NPIPB4C9JG80 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
NPIPB4C9JG80 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.7□□□□□ -0.38
NPIPB4C9JG80 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
NPIPB4C9JG80 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NPIPB4C9JG80 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC12.7□□□□□ -0.38
NPIPB4C9JG80 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
NPIPB4C9JG80 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
NPIPB4C9JG80 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
NPIPB4C9JG80 DPM3-202ENST00000368399 517 ntBASIC12.7□□□□□ -0.38
NPIPB4C9JG80 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms