Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 AC044860.1-202ENST00000559481 777 ntBASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 KLK8-205ENST00000593490 267 ntTSL 3 BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 AL158212.4-201ENST00000624062 1286 ntBASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 AC087499.5-201ENST00000452760 1342 ntBASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 AC114812.1-204ENST00000449669 728 ntBASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 AC026434.2-201ENST00000506094 1078 ntBASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 KRT18P58-201ENST00000527480 1120 ntBASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 ZNF890P-202ENST00000530367 1156 ntBASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 AC131206.1-201ENST00000538078 1211 ntBASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 AC069262.1-201ENST00000539058 672 ntBASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 AC036164.1-201ENST00000570544 333 ntBASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 AL138828.2-201ENST00000615812 383 ntBASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 NME4-212ENST00000621774 904 ntTSL 3 BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 NCLP1-201ENST00000445357 1963 ntBASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC12.15□□□□□ -0.46
KCNIP3Q9Y2W7 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms