Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HPS5Q9UPZ3 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HPS5Q9UPZ3 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HPS5Q9UPZ3 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HPS5Q9UPZ3 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HPS5Q9UPZ3 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HPS5Q9UPZ3 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HPS5Q9UPZ3 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HPS5Q9UPZ3 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.1■□□□□ 0.33
HPS5Q9UPZ3 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HPS5Q9UPZ3 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
HPS5Q9UPZ3 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HPS5Q9UPZ3 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HPS5Q9UPZ3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HPS5Q9UPZ3 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HPS5Q9UPZ3 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HPS5Q9UPZ3 AL357563.1-201ENST00000404728 395 ntBASIC17.1■□□□□ 0.33
HPS5Q9UPZ3 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HPS5Q9UPZ3 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HPS5Q9UPZ3 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC17.1■□□□□ 0.33
HPS5Q9UPZ3 AL157407.1-201ENST00000435784 904 ntBASIC17.1■□□□□ 0.33
HPS5Q9UPZ3 SKA2-202ENST00000437036 625 ntTSL 2 BASIC17.1■□□□□ 0.33
HPS5Q9UPZ3 MTND4LP12-201ENST00000448237 295 ntBASIC17.1■□□□□ 0.33
HPS5Q9UPZ3 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC17.1■□□□□ 0.33
HPS5Q9UPZ3 AL035414.1-201ENST00000451327 857 ntBASIC17.1■□□□□ 0.33
HPS5Q9UPZ3 RN7SL396P-201ENST00000471086 295 ntBASIC17.1■□□□□ 0.33
HPS5Q9UPZ3 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
HPS5Q9UPZ3 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC17.1■□□□□ 0.33
HPS5Q9UPZ3 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.1■□□□□ 0.33
HPS5Q9UPZ3 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC17.1■□□□□ 0.33
HPS5Q9UPZ3 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC17.1■□□□□ 0.33
HPS5Q9UPZ3 AC005618.3-201ENST00000624928 458 ntBASIC17.1■□□□□ 0.33
HPS5Q9UPZ3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HPS5Q9UPZ3 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HPS5Q9UPZ3 KRT8P21-201ENST00000430398 1491 ntBASIC17.1■□□□□ 0.33
HPS5Q9UPZ3 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HPS5Q9UPZ3 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HPS5Q9UPZ3 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HPS5Q9UPZ3 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HPS5Q9UPZ3 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HPS5Q9UPZ3 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HPS5Q9UPZ3 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC17.1■□□□□ 0.33
HPS5Q9UPZ3 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
HPS5Q9UPZ3 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC17.1■□□□□ 0.33
HPS5Q9UPZ3 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HPS5Q9UPZ3 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 FAM58BP-201ENST00000439056 645 ntBASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 AC004837.1-201ENST00000446267 564 ntBASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 NDUFS6P1-201ENST00000485187 316 ntBASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 AC084752.1-201ENST00000509766 622 ntBASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 MIR4522-201ENST00000584932 87 ntBASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 MEG3_2.1-201ENST00000611456 105 ntBASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 MIR6769A-201ENST00000617340 73 ntBASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 AC025262.2-201ENST00000623975 1056 ntBASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 Z98259.2-201ENST00000641583 609 ntBASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC17.09■□□□□ 0.33
HPS5Q9UPZ3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
HPS5Q9UPZ3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
HPS5Q9UPZ3 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
HPS5Q9UPZ3 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
HPS5Q9UPZ3 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HPS5Q9UPZ3 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
HPS5Q9UPZ3 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC17.08■□□□□ 0.33
HPS5Q9UPZ3 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms