Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 AL139094.1-201ENST00000405549 1188 ntBASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 HLA-V-201ENST00000429037 534 ntBASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 CSF2RBP1-201ENST00000447905 391 ntBASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 GNRHR2-203ENST00000581100 1187 ntBASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 AC060766.1-201ENST00000590824 627 ntBASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TIMMDC1Q9NPL8 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TIMMDC1Q9NPL8 TSN-212ENST00000536142 3328 ntTSL 2 BASIC14.02□□□□□ -0.16
TIMMDC1Q9NPL8 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TIMMDC1Q9NPL8 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC14.02□□□□□ -0.16
TIMMDC1Q9NPL8 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.02□□□□□ -0.16
TIMMDC1Q9NPL8 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC14.02□□□□□ -0.16
TIMMDC1Q9NPL8 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TIMMDC1Q9NPL8 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TIMMDC1Q9NPL8 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TIMMDC1Q9NPL8 AL158070.2-201ENST00000623713 1621 ntBASIC14.02□□□□□ -0.16
TIMMDC1Q9NPL8 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
TIMMDC1Q9NPL8 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TIMMDC1Q9NPL8 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.02□□□□□ -0.16
TIMMDC1Q9NPL8 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TIMMDC1Q9NPL8 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
TIMMDC1Q9NPL8 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TIMMDC1Q9NPL8 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TIMMDC1Q9NPL8 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TIMMDC1Q9NPL8 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TIMMDC1Q9NPL8 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TIMMDC1Q9NPL8 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
TIMMDC1Q9NPL8 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.02□□□□□ -0.17
TIMMDC1Q9NPL8 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
TIMMDC1Q9NPL8 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.02□□□□□ -0.17
TIMMDC1Q9NPL8 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TIMMDC1Q9NPL8 YBX1P6-201ENST00000442962 1002 ntBASIC14.02□□□□□ -0.17
TIMMDC1Q9NPL8 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.02□□□□□ -0.17
TIMMDC1Q9NPL8 BNIP3P42-201ENST00000454982 569 ntBASIC14.02□□□□□ -0.17
TIMMDC1Q9NPL8 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.02□□□□□ -0.17
TIMMDC1Q9NPL8 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.02□□□□□ -0.17
TIMMDC1Q9NPL8 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.02□□□□□ -0.17
TIMMDC1Q9NPL8 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
TIMMDC1Q9NPL8 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TIMMDC1Q9NPL8 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.02□□□□□ -0.17
TIMMDC1Q9NPL8 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.02□□□□□ -0.17
TIMMDC1Q9NPL8 BNIP3P29-201ENST00000598302 571 ntBASIC14.02□□□□□ -0.17
TIMMDC1Q9NPL8 AC011447.5-201ENST00000616168 564 ntBASIC14.02□□□□□ -0.17
TIMMDC1Q9NPL8 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.02□□□□□ -0.17
TIMMDC1Q9NPL8 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
TIMMDC1Q9NPL8 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TIMMDC1Q9NPL8 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
TIMMDC1Q9NPL8 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
TIMMDC1Q9NPL8 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TIMMDC1Q9NPL8 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TIMMDC1Q9NPL8 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
TIMMDC1Q9NPL8 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC14.02□□□□□ -0.17
TIMMDC1Q9NPL8 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.02□□□□□ -0.17
TIMMDC1Q9NPL8 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TIMMDC1Q9NPL8 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TIMMDC1Q9NPL8 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TIMMDC1Q9NPL8 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC14.01□□□□□ -0.17
TIMMDC1Q9NPL8 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.01□□□□□ -0.17
TIMMDC1Q9NPL8 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.01□□□□□ -0.17
TIMMDC1Q9NPL8 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
TIMMDC1Q9NPL8 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TIMMDC1Q9NPL8 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.01□□□□□ -0.17
TIMMDC1Q9NPL8 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms