Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
HPS1Q92902 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HPS1Q92902 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
HPS1Q92902 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
HPS1Q92902 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HPS1Q92902 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HPS1Q92902 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HPS1Q92902 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HPS1Q92902 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HPS1Q92902 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HPS1Q92902 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.41□□□□□ -0.26
HPS1Q92902 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
HPS1Q92902 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
HPS1Q92902 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HPS1Q92902 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HPS1Q92902 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HPS1Q92902 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC13.41□□□□□ -0.26
HPS1Q92902 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HPS1Q92902 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC13.41□□□□□ -0.26
HPS1Q92902 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HPS1Q92902 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
HPS1Q92902 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
HPS1Q92902 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
HPS1Q92902 AZGP1P1-201ENST00000411909 902 ntBASIC13.41□□□□□ -0.26
HPS1Q92902 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.41□□□□□ -0.26
HPS1Q92902 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC13.41□□□□□ -0.26
HPS1Q92902 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.41□□□□□ -0.26
HPS1Q92902 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
HPS1Q92902 GNAQP1-201ENST00000444815 1067 ntBASIC13.41□□□□□ -0.26
HPS1Q92902 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HPS1Q92902 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.41□□□□□ -0.26
HPS1Q92902 RN7SL752P-201ENST00000463779 287 ntBASIC13.41□□□□□ -0.26
HPS1Q92902 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC13.41□□□□□ -0.26
HPS1Q92902 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
HPS1Q92902 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
HPS1Q92902 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.41□□□□□ -0.26
HPS1Q92902 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.41□□□□□ -0.26
HPS1Q92902 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.41□□□□□ -0.26
HPS1Q92902 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.41□□□□□ -0.26
HPS1Q92902 AC122134.1-202ENST00000569111 1201 ntBASIC13.41□□□□□ -0.26
HPS1Q92902 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.41□□□□□ -0.26
HPS1Q92902 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HPS1Q92902 AC074044.1-201ENST00000609673 707 ntBASIC13.41□□□□□ -0.26
HPS1Q92902 AL008721.1-201ENST00000609964 604 ntBASIC13.41□□□□□ -0.26
HPS1Q92902 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HPS1Q92902 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC13.41□□□□□ -0.26
HPS1Q92902 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HPS1Q92902 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HPS1Q92902 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
HPS1Q92902 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.41□□□□□ -0.26
HPS1Q92902 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
HPS1Q92902 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HPS1Q92902 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HPS1Q92902 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
HPS1Q92902 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
HPS1Q92902 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HPS1Q92902 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HPS1Q92902 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HPS1Q92902 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HPS1Q92902 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
HPS1Q92902 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.41□□□□□ -0.26
HPS1Q92902 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.41□□□□□ -0.26
HPS1Q92902 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HPS1Q92902 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.4□□□□□ -0.26
HPS1Q92902 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
HPS1Q92902 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
HPS1Q92902 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
HPS1Q92902 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.4□□□□□ -0.26
HPS1Q92902 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HPS1Q92902 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
HPS1Q92902 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HPS1Q92902 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC13.4□□□□□ -0.26
HPS1Q92902 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HPS1Q92902 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HPS1Q92902 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
HPS1Q92902 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
HPS1Q92902 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HPS1Q92902 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HPS1Q92902 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HPS1Q92902 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HPS1Q92902 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.4□□□□□ -0.26
HPS1Q92902 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.4□□□□□ -0.26
HPS1Q92902 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
HPS1Q92902 AL117351.1-201ENST00000438864 766 ntBASIC13.4□□□□□ -0.26
HPS1Q92902 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.4□□□□□ -0.26
HPS1Q92902 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.4□□□□□ -0.26
HPS1Q92902 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC13.4□□□□□ -0.26
HPS1Q92902 GIMAP3P-201ENST00000495150 836 ntBASIC13.4□□□□□ -0.26
HPS1Q92902 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HPS1Q92902 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.4□□□□□ -0.26
HPS1Q92902 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.4□□□□□ -0.26
HPS1Q92902 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.4□□□□□ -0.26
HPS1Q92902 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.4□□□□□ -0.26
HPS1Q92902 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.4□□□□□ -0.26
HPS1Q92902 RRP7BP-205ENST00000566851 833 ntBASIC13.4□□□□□ -0.26
HPS1Q92902 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.4□□□□□ -0.26
HPS1Q92902 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
HPS1Q92902 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HPS1Q92902 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.4□□□□□ -0.26
HPS1Q92902 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms