Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 AC002350.2-201ENST00000623894 1828 ntBASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 OFD1-203ENST00000380567 3736 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 HPSE2-202ENST00000370549 2121 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 AC092028.1-202ENST00000641483 3547 ntBASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 AC092028.1-201ENST00000641781 3540 ntBASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 TSFM-210ENST00000550559 897 ntTSL 5 BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 PIN1-206ENST00000587625 878 ntTSL 2 BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 C20orf181-201ENST00000623918 480 ntBASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 CAND2-206ENST00000626378 333 ntTSL 5 BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 AC105339.1-204ENST00000636249 355 ntBASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 GALNT15-203ENST00000437509 2416 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 SHC1P1-201ENST00000425230 1745 ntBASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 AL136172.1-201ENST00000598590 1394 ntBASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 SLC44A4-202ENST00000229729 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 AOC2-202ENST00000452774 2572 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LYSMD2Q8IV50 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 TMEM147-AS1-205ENST00000590717 3300 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LYSMD2Q8IV50 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms