Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
SCXQ7RTU7 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SCXQ7RTU7 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SCXQ7RTU7 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC9.69□□□□□ -0.86
SCXQ7RTU7 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
SCXQ7RTU7 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SCXQ7RTU7 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC9.69□□□□□ -0.86
SCXQ7RTU7 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SCXQ7RTU7 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SCXQ7RTU7 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SCXQ7RTU7 BTBD6P1-201ENST00000412176 1267 ntBASIC9.69□□□□□ -0.86
SCXQ7RTU7 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
SCXQ7RTU7 BEND3P1-201ENST00000421591 1944 ntBASIC9.69□□□□□ -0.86
SCXQ7RTU7 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC9.69□□□□□ -0.86
SCXQ7RTU7 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC9.69□□□□□ -0.86
SCXQ7RTU7 AC007969.1-201ENST00000433675 447 ntBASIC9.69□□□□□ -0.86
SCXQ7RTU7 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
SCXQ7RTU7 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC9.69□□□□□ -0.86
SCXQ7RTU7 MTX1P1-201ENST00000440904 838 ntBASIC9.69□□□□□ -0.86
SCXQ7RTU7 GOLGA2P4-201ENST00000441462 777 ntBASIC9.69□□□□□ -0.86
SCXQ7RTU7 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
SCXQ7RTU7 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC9.69□□□□□ -0.86
SCXQ7RTU7 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC9.69□□□□□ -0.86
SCXQ7RTU7 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC9.69□□□□□ -0.86
SCXQ7RTU7 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC9.69□□□□□ -0.86
SCXQ7RTU7 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC9.69□□□□□ -0.86
SCXQ7RTU7 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC9.69□□□□□ -0.86
SCXQ7RTU7 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC9.69□□□□□ -0.86
SCXQ7RTU7 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC9.69□□□□□ -0.86
SCXQ7RTU7 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC9.69□□□□□ -0.86
SCXQ7RTU7 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC9.69□□□□□ -0.86
SCXQ7RTU7 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
SCXQ7RTU7 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC9.69□□□□□ -0.86
SCXQ7RTU7 AC084364.1-201ENST00000551967 1556 ntBASIC9.69□□□□□ -0.86
SCXQ7RTU7 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SCXQ7RTU7 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC9.69□□□□□ -0.86
SCXQ7RTU7 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
SCXQ7RTU7 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SCXQ7RTU7 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC9.69□□□□□ -0.86
SCXQ7RTU7 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
SCXQ7RTU7 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC9.69□□□□□ -0.86
SCXQ7RTU7 RN7SL48P-201ENST00000579283 293 ntBASIC9.69□□□□□ -0.86
SCXQ7RTU7 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC9.69□□□□□ -0.86
SCXQ7RTU7 RPS15-205ENST00000586686 562 ntTSL 5 BASIC9.69□□□□□ -0.86
SCXQ7RTU7 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
SCXQ7RTU7 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC9.69□□□□□ -0.86
SCXQ7RTU7 RPS15-208ENST00000591804 711 ntTSL 5 BASIC9.69□□□□□ -0.86
SCXQ7RTU7 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
SCXQ7RTU7 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SCXQ7RTU7 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC9.69□□□□□ -0.86
SCXQ7RTU7 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC9.69□□□□□ -0.86
SCXQ7RTU7 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
SCXQ7RTU7 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC9.69□□□□□ -0.86
SCXQ7RTU7 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SCXQ7RTU7 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
SCXQ7RTU7 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
SCXQ7RTU7 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
SCXQ7RTU7 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC9.69□□□□□ -0.86
SCXQ7RTU7 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC9.69□□□□□ -0.86
SCXQ7RTU7 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
SCXQ7RTU7 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SCXQ7RTU7 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SCXQ7RTU7 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC9.69□□□□□ -0.86
SCXQ7RTU7 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC9.69□□□□□ -0.86
SCXQ7RTU7 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC9.69□□□□□ -0.86
SCXQ7RTU7 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SCXQ7RTU7 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SCXQ7RTU7 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SCXQ7RTU7 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
SCXQ7RTU7 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SCXQ7RTU7 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
SCXQ7RTU7 AC127383.1-201ENST00000444697 1800 ntBASIC9.68□□□□□ -0.86
SCXQ7RTU7 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SCXQ7RTU7 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
SCXQ7RTU7 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SCXQ7RTU7 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
SCXQ7RTU7 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SCXQ7RTU7 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SCXQ7RTU7 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SCXQ7RTU7 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC9.68□□□□□ -0.86
SCXQ7RTU7 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SCXQ7RTU7 AL158070.2-201ENST00000623713 1621 ntBASIC9.68□□□□□ -0.86
SCXQ7RTU7 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
SCXQ7RTU7 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SCXQ7RTU7 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SCXQ7RTU7 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SCXQ7RTU7 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC9.68□□□□□ -0.86
SCXQ7RTU7 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SCXQ7RTU7 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SCXQ7RTU7 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SCXQ7RTU7 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC9.68□□□□□ -0.86
SCXQ7RTU7 RPS3-201ENST00000278572 907 ntTSL 3 BASIC9.68□□□□□ -0.86
SCXQ7RTU7 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
SCXQ7RTU7 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SCXQ7RTU7 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SCXQ7RTU7 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SCXQ7RTU7 AL139094.1-201ENST00000405549 1188 ntBASIC9.68□□□□□ -0.86
SCXQ7RTU7 GPAA1P2-201ENST00000417923 928 ntBASIC9.68□□□□□ -0.86
SCXQ7RTU7 AC006033.1-201ENST00000440505 426 ntBASIC9.68□□□□□ -0.86
SCXQ7RTU7 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC9.68□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms