Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 AC245100.3-201ENST00000441281 285 ntBASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 GNAQP1-201ENST00000444815 1067 ntBASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 KSR1-207ENST00000578981 748 ntTSL 4 BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 AC099568.2-201ENST00000609194 695 ntBASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 AC005252.2-201ENST00000624630 1141 ntBASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 F2-205ENST00000530231 1849 ntTSL 5 BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 KRT8P28-201ENST00000433288 1390 ntBASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 GOLGA8EP-201ENST00000530246 1959 ntBASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 FKBP4P6-201ENST00000457486 1332 ntBASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 CALY-202ENST00000368555 783 ntTSL 2 BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 OSM-203ENST00000403463 464 ntTSL 3 BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 AK2P2-201ENST00000439142 405 ntBASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 MYCLP2-201ENST00000449268 967 ntBASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC9.9□□□□□ -0.82
LINC00242Q5T6M2 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC9.9□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms