Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 AC097376.2-205ENST00000610159 5334 ntBASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 AC111170.3-201ENST00000624282 2464 ntBASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 FAM86MP-201ENST00000340703 885 ntBASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 AC005740.2-201ENST00000511085 419 ntBASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 AL451050.2-201ENST00000606967 682 ntBASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN20Q4JDL3 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.02
PTPN20Q4JDL3 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 AC023794.5-201ENST00000564380 2157 ntBASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 AC004898.1-201ENST00000451057 766 ntBASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 MARK2P5-201ENST00000507649 634 ntBASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 MIR4538-201ENST00000581377 78 ntBASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 RN7SL219P-201ENST00000582872 296 ntBASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 AL136295.7-201ENST00000619226 1200 ntBASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 AC007326.2-201ENST00000624224 7579 ntBASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN20Q4JDL3 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms