Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC12.4□□□□□ -0.42
CCL1P22362 TECR-220ENST00000600083 1204 ntTSL 2 BASIC12.4□□□□□ -0.42
CCL1P22362 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.4□□□□□ -0.42
CCL1P22362 AC133540.1-201ENST00000620845 1019 ntBASIC12.4□□□□□ -0.42
CCL1P22362 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL1P22362 AL162426.1-201ENST00000624141 743 ntBASIC12.4□□□□□ -0.42
CCL1P22362 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC12.4□□□□□ -0.42
CCL1P22362 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CCL1P22362 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL1P22362 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.4□□□□□ -0.42
CCL1P22362 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL1P22362 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL1P22362 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.4□□□□□ -0.42
CCL1P22362 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.4□□□□□ -0.42
CCL1P22362 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL1P22362 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CCL1P22362 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CCL1P22362 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CCL1P22362 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.4□□□□□ -0.43
CCL1P22362 RCC2P1-201ENST00000452257 1476 ntBASIC12.4□□□□□ -0.43
CCL1P22362 AC061965.1-201ENST00000560524 1465 ntBASIC12.4□□□□□ -0.43
CCL1P22362 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.43
CCL1P22362 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC12.4□□□□□ -0.43
CCL1P22362 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.39□□□□□ -0.43
CCL1P22362 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.39□□□□□ -0.43
CCL1P22362 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL1P22362 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL1P22362 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL1P22362 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CCL1P22362 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL1P22362 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL1P22362 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL1P22362 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL1P22362 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CCL1P22362 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL1P22362 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.39□□□□□ -0.43
CCL1P22362 AC144522.1-201ENST00000625111 1658 ntBASIC12.39□□□□□ -0.43
CCL1P22362 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CCL1P22362 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC12.39□□□□□ -0.43
CCL1P22362 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
CCL1P22362 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL1P22362 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
CCL1P22362 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL1P22362 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CCL1P22362 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL1P22362 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC12.39□□□□□ -0.43
CCL1P22362 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL1P22362 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.39□□□□□ -0.43
CCL1P22362 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL1P22362 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL1P22362 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL1P22362 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL1P22362 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL1P22362 AC026954.1-201ENST00000429771 1293 ntBASIC12.39□□□□□ -0.43
CCL1P22362 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.39□□□□□ -0.43
CCL1P22362 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC12.39□□□□□ -0.43
CCL1P22362 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
CCL1P22362 AC006122.1-201ENST00000493323 440 ntBASIC12.39□□□□□ -0.43
CCL1P22362 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC12.39□□□□□ -0.43
CCL1P22362 AC140658.4-201ENST00000561990 352 ntBASIC12.39□□□□□ -0.43
CCL1P22362 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC12.39□□□□□ -0.43
CCL1P22362 AC106886.1-201ENST00000568660 600 ntBASIC12.39□□□□□ -0.43
CCL1P22362 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC12.39□□□□□ -0.43
CCL1P22362 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC12.39□□□□□ -0.43
CCL1P22362 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CCL1P22362 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC12.39□□□□□ -0.43
CCL1P22362 RPL35-206ENST00000629845 340 ntTSL 5 BASIC12.39□□□□□ -0.43
CCL1P22362 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL1P22362 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL1P22362 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.39□□□□□ -0.43
CCL1P22362 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CCL1P22362 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL1P22362 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.39□□□□□ -0.43
CCL1P22362 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.39□□□□□ -0.43
CCL1P22362 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.39□□□□□ -0.43
CCL1P22362 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.39□□□□□ -0.43
CCL1P22362 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.39□□□□□ -0.43
CCL1P22362 LINC02486-201ENST00000604157 3000 ntBASIC12.39□□□□□ -0.43
CCL1P22362 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.39□□□□□ -0.43
CCL1P22362 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL1P22362 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL1P22362 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL1P22362 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.39□□□□□ -0.43
CCL1P22362 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL1P22362 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.39□□□□□ -0.43
CCL1P22362 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.39□□□□□ -0.43
CCL1P22362 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CCL1P22362 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.39□□□□□ -0.43
CCL1P22362 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL1P22362 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
CCL1P22362 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL1P22362 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL1P22362 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC12.38□□□□□ -0.43
CCL1P22362 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL1P22362 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.38□□□□□ -0.43
CCL1P22362 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL1P22362 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL1P22362 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL1P22362 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
CCL1P22362 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms