Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.61□□□□□ -0.07
VCLP18206 REXO1L6P-201ENST00000603433 1515 ntBASIC14.61□□□□□ -0.07
VCLP18206 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.61□□□□□ -0.07
VCLP18206 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.61□□□□□ -0.07
VCLP18206 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VCLP18206 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VCLP18206 AC020910.5-201ENST00000623668 1865 ntBASIC14.61□□□□□ -0.07
VCLP18206 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
VCLP18206 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
VCLP18206 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.61□□□□□ -0.07
VCLP18206 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VCLP18206 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
VCLP18206 AGGF1P1-201ENST00000509500 2073 ntBASIC14.61□□□□□ -0.07
VCLP18206 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VCLP18206 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
VCLP18206 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
VCLP18206 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
VCLP18206 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.61□□□□□ -0.07
VCLP18206 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
VCLP18206 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.61□□□□□ -0.07
VCLP18206 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
VCLP18206 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.61□□□□□ -0.07
VCLP18206 ACTBP11-201ENST00000436287 1126 ntBASIC14.61□□□□□ -0.07
VCLP18206 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VCLP18206 CHMP1AP1-201ENST00000445563 662 ntBASIC14.61□□□□□ -0.07
VCLP18206 HIST2H2BB-201ENST00000449108 381 ntBASIC14.61□□□□□ -0.07
VCLP18206 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
VCLP18206 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.61□□□□□ -0.07
VCLP18206 AC092658.1-201ENST00000505836 891 ntBASIC14.61□□□□□ -0.07
VCLP18206 ALG3P1-201ENST00000508806 1114 ntBASIC14.61□□□□□ -0.07
VCLP18206 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.61□□□□□ -0.07
VCLP18206 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.61□□□□□ -0.07
VCLP18206 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.61□□□□□ -0.07
VCLP18206 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.61□□□□□ -0.07
VCLP18206 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.61□□□□□ -0.07
VCLP18206 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.61□□□□□ -0.07
VCLP18206 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
VCLP18206 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.61□□□□□ -0.07
VCLP18206 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
VCLP18206 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.61□□□□□ -0.07
VCLP18206 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.61□□□□□ -0.07
VCLP18206 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VCLP18206 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
VCLP18206 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
VCLP18206 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VCLP18206 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VCLP18206 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.61□□□□□ -0.07
VCLP18206 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VCLP18206 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
VCLP18206 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VCLP18206 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.61□□□□□ -0.07
VCLP18206 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.61□□□□□ -0.07
VCLP18206 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VCLP18206 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VCLP18206 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
VCLP18206 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
VCLP18206 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.61□□□□□ -0.07
VCLP18206 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
VCLP18206 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VCLP18206 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
VCLP18206 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.6□□□□□ -0.07
VCLP18206 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
VCLP18206 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
VCLP18206 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VCLP18206 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.6□□□□□ -0.07
VCLP18206 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
VCLP18206 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VCLP18206 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
VCLP18206 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.6□□□□□ -0.07
VCLP18206 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.6□□□□□ -0.07
VCLP18206 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VCLP18206 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VCLP18206 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VCLP18206 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VCLP18206 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.6□□□□□ -0.07
VCLP18206 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
VCLP18206 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VCLP18206 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
VCLP18206 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VCLP18206 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
VCLP18206 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.6□□□□□ -0.07
VCLP18206 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.6□□□□□ -0.07
VCLP18206 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
VCLP18206 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
VCLP18206 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.6□□□□□ -0.07
VCLP18206 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.6□□□□□ -0.07
VCLP18206 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.6□□□□□ -0.07
VCLP18206 AC131206.1-201ENST00000538078 1211 ntBASIC14.6□□□□□ -0.07
VCLP18206 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.6□□□□□ -0.07
VCLP18206 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VCLP18206 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VCLP18206 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.6□□□□□ -0.07
VCLP18206 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.6□□□□□ -0.07
VCLP18206 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.6□□□□□ -0.07
VCLP18206 MIR4683-201ENST00000579659 81 ntBASIC14.6□□□□□ -0.07
VCLP18206 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.6□□□□□ -0.07
VCLP18206 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VCLP18206 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VCLP18206 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.6□□□□□ -0.07
VCLP18206 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms