Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
BMP4P12644 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BMP4P12644 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.37□□□□□ -0.27
BMP4P12644 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
BMP4P12644 MIR658-201ENST00000385210 100 ntBASIC13.37□□□□□ -0.27
BMP4P12644 AL133267.1-201ENST00000398220 340 ntBASIC13.37□□□□□ -0.27
BMP4P12644 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
BMP4P12644 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
BMP4P12644 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
BMP4P12644 AC112492.5-201ENST00000421897 457 ntBASIC13.37□□□□□ -0.27
BMP4P12644 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.37□□□□□ -0.27
BMP4P12644 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
BMP4P12644 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.37□□□□□ -0.27
BMP4P12644 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BMP4P12644 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.37□□□□□ -0.27
BMP4P12644 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.37□□□□□ -0.27
BMP4P12644 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.37□□□□□ -0.27
BMP4P12644 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.37□□□□□ -0.27
BMP4P12644 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
BMP4P12644 AL049840.4-201ENST00000602422 811 ntBASIC13.37□□□□□ -0.27
BMP4P12644 AL391069.4-201ENST00000609583 481 ntBASIC13.37□□□□□ -0.27
BMP4P12644 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BMP4P12644 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
BMP4P12644 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
BMP4P12644 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
BMP4P12644 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
BMP4P12644 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BMP4P12644 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC13.37□□□□□ -0.27
BMP4P12644 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BMP4P12644 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BMP4P12644 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
BMP4P12644 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
BMP4P12644 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.37□□□□□ -0.27
BMP4P12644 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
BMP4P12644 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
BMP4P12644 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
BMP4P12644 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC13.37□□□□□ -0.27
BMP4P12644 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC13.37□□□□□ -0.27
BMP4P12644 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
BMP4P12644 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BMP4P12644 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.37□□□□□ -0.27
BMP4P12644 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
BMP4P12644 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
BMP4P12644 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.37□□□□□ -0.27
BMP4P12644 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
BMP4P12644 AC092053.3-201ENST00000641308 4975 ntBASIC13.37□□□□□ -0.27
BMP4P12644 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BMP4P12644 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
BMP4P12644 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
BMP4P12644 AP000437.1-201ENST00000624057 2085 ntBASIC13.36□□□□□ -0.27
BMP4P12644 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC13.36□□□□□ -0.27
BMP4P12644 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BMP4P12644 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BMP4P12644 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BMP4P12644 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
BMP4P12644 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BMP4P12644 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BMP4P12644 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BMP4P12644 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
BMP4P12644 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.36□□□□□ -0.27
BMP4P12644 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
BMP4P12644 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
BMP4P12644 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
BMP4P12644 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
BMP4P12644 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
BMP4P12644 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
BMP4P12644 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
BMP4P12644 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.36□□□□□ -0.27
BMP4P12644 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BMP4P12644 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.36□□□□□ -0.27
BMP4P12644 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
BMP4P12644 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.36□□□□□ -0.27
BMP4P12644 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.36□□□□□ -0.27
BMP4P12644 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.36□□□□□ -0.27
BMP4P12644 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.36□□□□□ -0.27
BMP4P12644 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.36□□□□□ -0.27
BMP4P12644 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC13.36□□□□□ -0.27
BMP4P12644 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.36□□□□□ -0.27
BMP4P12644 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.36□□□□□ -0.27
BMP4P12644 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.36□□□□□ -0.27
BMP4P12644 AC008735.3-201ENST00000596646 500 ntBASIC13.36□□□□□ -0.27
BMP4P12644 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.36□□□□□ -0.27
BMP4P12644 AC093813.1-201ENST00000605066 256 ntBASIC13.36□□□□□ -0.27
BMP4P12644 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
BMP4P12644 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.36□□□□□ -0.27
BMP4P12644 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
BMP4P12644 AGAP10P-201ENST00000454844 2418 ntBASIC13.36□□□□□ -0.27
BMP4P12644 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BMP4P12644 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BMP4P12644 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
BMP4P12644 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BMP4P12644 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
BMP4P12644 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
BMP4P12644 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BMP4P12644 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BMP4P12644 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
BMP4P12644 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
BMP4P12644 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
BMP4P12644 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BMP4P12644 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms