Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CSF1P09603 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSF1P09603 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSF1P09603 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSF1P09603 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.59□□□□□ -0.39
CSF1P09603 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSF1P09603 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSF1P09603 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CSF1P09603 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSF1P09603 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.59□□□□□ -0.39
CSF1P09603 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC12.59□□□□□ -0.39
CSF1P09603 MEP1AP4-201ENST00000423244 1087 ntBASIC12.59□□□□□ -0.39
CSF1P09603 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CSF1P09603 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CSF1P09603 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CSF1P09603 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.59□□□□□ -0.39
CSF1P09603 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CSF1P09603 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC12.59□□□□□ -0.39
CSF1P09603 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC12.59□□□□□ -0.39
CSF1P09603 AC132938.2-201ENST00000579188 680 ntBASIC12.59□□□□□ -0.39
CSF1P09603 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CSF1P09603 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.59□□□□□ -0.39
CSF1P09603 AL591163.1-201ENST00000641757 987 ntBASIC12.59□□□□□ -0.39
CSF1P09603 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSF1P09603 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSF1P09603 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSF1P09603 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CSF1P09603 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSF1P09603 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSF1P09603 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CSF1P09603 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CSF1P09603 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CSF1P09603 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CSF1P09603 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSF1P09603 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSF1P09603 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSF1P09603 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
CSF1P09603 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CSF1P09603 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CSF1P09603 TUBB8P4-201ENST00000511806 1324 ntBASIC12.59□□□□□ -0.39
CSF1P09603 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CSF1P09603 AC093525.8-201ENST00000624099 1342 ntBASIC12.59□□□□□ -0.39
CSF1P09603 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSF1P09603 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSF1P09603 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSF1P09603 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CSF1P09603 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.59□□□□□ -0.39
CSF1P09603 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CSF1P09603 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CSF1P09603 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.39
CSF1P09603 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
CSF1P09603 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.58□□□□□ -0.39
CSF1P09603 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
CSF1P09603 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CSF1P09603 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CSF1P09603 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
CSF1P09603 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CSF1P09603 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
CSF1P09603 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
CSF1P09603 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CSF1P09603 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
CSF1P09603 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CSF1P09603 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC12.58□□□□□ -0.4
CSF1P09603 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
CSF1P09603 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
CSF1P09603 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.58□□□□□ -0.4
CSF1P09603 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CSF1P09603 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
CSF1P09603 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CSF1P09603 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
CSF1P09603 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CSF1P09603 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CSF1P09603 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
CSF1P09603 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.58□□□□□ -0.4
CSF1P09603 RASL12-203ENST00000434605 982 ntTSL 2 BASIC12.58□□□□□ -0.4
CSF1P09603 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.58□□□□□ -0.4
CSF1P09603 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CSF1P09603 ACA64.2-201ENST00000459014 129 ntBASIC12.58□□□□□ -0.4
CSF1P09603 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC12.58□□□□□ -0.4
CSF1P09603 NEU3-203ENST00000529024 581 ntTSL 3 BASIC12.58□□□□□ -0.4
CSF1P09603 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CSF1P09603 KRT17P8-201ENST00000540749 863 ntBASIC12.58□□□□□ -0.4
CSF1P09603 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
CSF1P09603 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.58□□□□□ -0.4
CSF1P09603 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC12.58□□□□□ -0.4
CSF1P09603 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC12.58□□□□□ -0.4
CSF1P09603 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CSF1P09603 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC12.58□□□□□ -0.4
CSF1P09603 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC12.58□□□□□ -0.4
CSF1P09603 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.58□□□□□ -0.4
CSF1P09603 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC12.58□□□□□ -0.4
CSF1P09603 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CSF1P09603 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CSF1P09603 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
CSF1P09603 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
CSF1P09603 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CSF1P09603 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CSF1P09603 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CSF1P09603 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CSF1P09603 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms