Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOA1P02647 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
APOA1P02647 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOA1P02647 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
APOA1P02647 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
APOA1P02647 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOA1P02647 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOA1P02647 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOA1P02647 AL137783.1-201ENST00000623494 1896 ntBASIC12.94□□□□□ -0.34
APOA1P02647 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
APOA1P02647 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC12.94□□□□□ -0.34
APOA1P02647 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
APOA1P02647 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOA1P02647 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOA1P02647 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
APOA1P02647 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
APOA1P02647 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC12.94□□□□□ -0.34
APOA1P02647 TOMM22P5-201ENST00000416399 439 ntBASIC12.94□□□□□ -0.34
APOA1P02647 HNRNPA1P28-201ENST00000424481 961 ntBASIC12.94□□□□□ -0.34
APOA1P02647 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC12.94□□□□□ -0.34
APOA1P02647 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC12.94□□□□□ -0.34
APOA1P02647 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOA1P02647 AC055717.3-201ENST00000622967 595 ntBASIC12.94□□□□□ -0.34
APOA1P02647 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.94□□□□□ -0.34
APOA1P02647 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.94□□□□□ -0.34
APOA1P02647 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.94□□□□□ -0.34
APOA1P02647 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC12.94□□□□□ -0.34
APOA1P02647 SEC14L1-204ENST00000436233 5295 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOA1P02647 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
APOA1P02647 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
APOA1P02647 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOA1P02647 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
APOA1P02647 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC12.94□□□□□ -0.34
APOA1P02647 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
APOA1P02647 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOA1P02647 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOA1P02647 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOA1P02647 CDC6-201ENST00000209728 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOA1P02647 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOA1P02647 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOA1P02647 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOA1P02647 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOA1P02647 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12.93□□□□□ -0.34
APOA1P02647 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOA1P02647 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
APOA1P02647 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.93□□□□□ -0.34
APOA1P02647 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC12.93□□□□□ -0.34
APOA1P02647 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.93□□□□□ -0.34
APOA1P02647 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOA1P02647 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC12.93□□□□□ -0.34
APOA1P02647 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOA1P02647 AC102953.2-201ENST00000609755 3026 ntBASIC12.93□□□□□ -0.34
APOA1P02647 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC12.93□□□□□ -0.34
APOA1P02647 AC012531.1-201ENST00000562848 2680 ntBASIC12.93□□□□□ -0.34
APOA1P02647 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
APOA1P02647 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOA1P02647 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOA1P02647 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOA1P02647 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
APOA1P02647 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOA1P02647 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOA1P02647 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOA1P02647 BEX3-201ENST00000361298 921 ntTSL 2 BASIC12.93□□□□□ -0.34
APOA1P02647 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC12.93□□□□□ -0.34
APOA1P02647 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.93□□□□□ -0.34
APOA1P02647 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
APOA1P02647 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.93□□□□□ -0.34
APOA1P02647 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
APOA1P02647 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.93□□□□□ -0.34
APOA1P02647 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
APOA1P02647 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC12.93□□□□□ -0.34
APOA1P02647 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOA1P02647 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
APOA1P02647 MIR6069-201ENST00000620069 79 ntBASIC12.93□□□□□ -0.34
APOA1P02647 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC12.93□□□□□ -0.34
APOA1P02647 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOA1P02647 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC12.93□□□□□ -0.34
APOA1P02647 TMEM94-201ENST00000314256 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOA1P02647 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
APOA1P02647 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOA1P02647 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOA1P02647 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
APOA1P02647 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC12.93□□□□□ -0.34
APOA1P02647 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOA1P02647 AMBRA1-212ENST00000534300 5067 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
APOA1P02647 AC110048.1-201ENST00000604293 2157 ntBASIC12.93□□□□□ -0.34
APOA1P02647 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
APOA1P02647 B3GAT2-202ENST00000615536 5206 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
APOA1P02647 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC12.93□□□□□ -0.34
APOA1P02647 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
APOA1P02647 AC010970.1-201ENST00000445125 1848 ntBASIC12.92□□□□□ -0.34
APOA1P02647 WDR62-203ENST00000401500 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOA1P02647 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOA1P02647 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.92□□□□□ -0.34
APOA1P02647 LRRC8A-201ENST00000259324 4619 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
APOA1P02647 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOA1P02647 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
APOA1P02647 KRT8P35-201ENST00000483942 1338 ntBASIC12.92□□□□□ -0.34
APOA1P02647 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
APOA1P02647 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms