Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 CSNK1G2P1-201ENST00000442675 955 ntBASIC12.55□□□□□ -0.4
MBD3L3A6NE82 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 AC095040.1-201ENST00000513286 675 ntBASIC12.55□□□□□ -0.4
MBD3L3A6NE82 MBP-227ENST00000526111 581 ntTSL 4 BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 CR383656.3-201ENST00000551315 183 ntBASIC12.55□□□□□ -0.4
MBD3L3A6NE82 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 AL161773.1-201ENST00000624845 863 ntBASIC12.55□□□□□ -0.4
MBD3L3A6NE82 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 TUBB8P4-201ENST00000511806 1324 ntBASIC12.55□□□□□ -0.4
MBD3L3A6NE82 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 AC140479.7-201ENST00000636301 2332 ntBASIC12.55□□□□□ -0.4
MBD3L3A6NE82 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 BANP-201ENST00000286122 2368 ntTSL 5 BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 RGS5-216ENST00000449680 788 ntTSL 3 BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 CTBP2P4-201ENST00000513884 920 ntBASIC12.54□□□□□ -0.4
MBD3L3A6NE82 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 AP005264.5-201ENST00000590066 467 ntBASIC12.54□□□□□ -0.4
MBD3L3A6NE82 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 TP53-221ENST00000615910 1149 ntTSL 5 BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
MBD3L3A6NE82 KRT8P18-201ENST00000413425 1445 ntBASIC12.54□□□□□ -0.4
MBD3L3A6NE82 DUT-208ENST00000559540 1441 ntTSL 2 BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms