Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 AC244669.2-201ENST00000612320 853 ntBASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 MBLAC2-202ENST00000514906 1936 ntBASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NEUROD4Q9HD90 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.71□□□□□ -0.21
NEUROD4Q9HD90 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NEUROD4Q9HD90 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.71□□□□□ -0.21
NEUROD4Q9HD90 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.71□□□□□ -0.21
NEUROD4Q9HD90 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.71□□□□□ -0.21
NEUROD4Q9HD90 AL031595.1-201ENST00000623969 4709 ntBASIC13.71□□□□□ -0.21
NEUROD4Q9HD90 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
NEUROD4Q9HD90 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NEUROD4Q9HD90 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
NEUROD4Q9HD90 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NEUROD4Q9HD90 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
NEUROD4Q9HD90 SHC1P1-201ENST00000425230 1745 ntBASIC13.71□□□□□ -0.21
NEUROD4Q9HD90 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
NEUROD4Q9HD90 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NEUROD4Q9HD90 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
NEUROD4Q9HD90 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.71□□□□□ -0.21
NEUROD4Q9HD90 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.71□□□□□ -0.21
NEUROD4Q9HD90 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NEUROD4Q9HD90 USP17L6P-201ENST00000382470 1197 ntBASIC13.71□□□□□ -0.21
NEUROD4Q9HD90 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
NEUROD4Q9HD90 ACTBP11-201ENST00000436287 1126 ntBASIC13.71□□□□□ -0.21
NEUROD4Q9HD90 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.71□□□□□ -0.21
NEUROD4Q9HD90 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NEUROD4Q9HD90 AC119751.2-201ENST00000504529 210 ntBASIC13.71□□□□□ -0.21
NEUROD4Q9HD90 AC091917.2-201ENST00000505002 744 ntBASIC13.71□□□□□ -0.21
NEUROD4Q9HD90 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.71□□□□□ -0.21
NEUROD4Q9HD90 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.71□□□□□ -0.21
NEUROD4Q9HD90 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
NEUROD4Q9HD90 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
NEUROD4Q9HD90 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.71□□□□□ -0.21
NEUROD4Q9HD90 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NEUROD4Q9HD90 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NEUROD4Q9HD90 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NEUROD4Q9HD90 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
NEUROD4Q9HD90 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NEUROD4Q9HD90 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.71□□□□□ -0.22
NEUROD4Q9HD90 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NEUROD4Q9HD90 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NEUROD4Q9HD90 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NEUROD4Q9HD90 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NEUROD4Q9HD90 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
NEUROD4Q9HD90 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
NEUROD4Q9HD90 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
NEUROD4Q9HD90 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 AHCYP2-201ENST00000430630 1300 ntBASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 DMBT1P1-203ENST00000636837 4628 ntBASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 KRT8P4-201ENST00000509735 1454 ntBASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
NEUROD4Q9HD90 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms