Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 KRTAP10-13P-201ENST00000412914 571 ntBASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 AC006033.1-201ENST00000440505 426 ntBASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 AC021723.1-201ENST00000486306 515 ntBASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 AC138696.2-201ENST00000607376 223 ntBASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 MIR6787-201ENST00000616675 61 ntBASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 AL008638.5-201ENST00000623814 1298 ntBASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
PCGF1Q9BSM1 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 AC009093.2-202ENST00000620513 2079 ntBASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 NME6-203ENST00000415644 849 ntTSL 2 BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 HNRNPA1P63-201ENST00000427917 963 ntBASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 CHMP1AP1-201ENST00000445563 662 ntBASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 HSPB1P2-201ENST00000448722 546 ntBASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 AC100850.1-201ENST00000506768 649 ntBASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms