Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 AC013355.1-201ENST00000562625 723 ntBASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 AC100827.2-201ENST00000563214 1194 ntBASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 RN7SL163P-201ENST00000583100 276 ntBASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 BNIP3P13-201ENST00000599968 566 ntBASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 AC002472.3-201ENST00000640124 621 ntBASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 AC004923.1-202ENST00000642106 209 ntBASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 AP000593.2-201ENST00000542775 1433 ntBASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 AC008132.1-202ENST00000342005 1389 ntBASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC33Q8N5R6 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 PTPA-217ENST00000434095 870 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 TPT1P11-201ENST00000458482 498 ntBASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 AC026740.1-201ENST00000607068 791 ntBASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC33Q8N5R6 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CCDC33Q8N5R6 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC33Q8N5R6 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC33Q8N5R6 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC33Q8N5R6 BEND3P1-201ENST00000421591 1944 ntBASIC15.21■□□□□ 0.03
CCDC33Q8N5R6 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC33Q8N5R6 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC33Q8N5R6 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC33Q8N5R6 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC33Q8N5R6 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CCDC33Q8N5R6 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC33Q8N5R6 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC33Q8N5R6 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC33Q8N5R6 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
CCDC33Q8N5R6 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms