Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
H3F3CQ6NXT2 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.4□□□□□ -0.27
H3F3CQ6NXT2 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
H3F3CQ6NXT2 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
H3F3CQ6NXT2 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
H3F3CQ6NXT2 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 MYADML-201ENST00000474610 2147 ntBASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 EEF1DP6-201ENST00000449232 372 ntBASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 CDK7-214ENST00000626796 358 ntTSL 5 BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 AC005912.2-201ENST00000619492 2400 ntBASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H3F3CQ6NXT2 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 FAM90A2P-201ENST00000511144 1395 ntBASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 FAM90A25P-201ENST00000528404 1395 ntBASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 AC010327.5-201ENST00000586923 3061 ntBASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 AC026320.2-201ENST00000434379 478 ntBASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 SORD2P-201ENST00000558556 1069 ntBASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 PHBP15-201ENST00000574228 665 ntBASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 MIR6074-201ENST00000612054 107 ntBASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms