Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CD47Q08722 AL136172.1-201ENST00000598590 1394 ntBASIC13.5□□□□□ -0.25
CD47Q08722 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD47Q08722 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CD47Q08722 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CD47Q08722 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.5□□□□□ -0.25
CD47Q08722 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.5□□□□□ -0.25
CD47Q08722 MYCLP2-201ENST00000449268 967 ntBASIC13.5□□□□□ -0.25
CD47Q08722 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD47Q08722 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.5□□□□□ -0.25
CD47Q08722 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CD47Q08722 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.5□□□□□ -0.25
CD47Q08722 AC092552.1-201ENST00000547243 906 ntBASIC13.5□□□□□ -0.25
CD47Q08722 AL359711.2-201ENST00000563105 872 ntBASIC13.5□□□□□ -0.25
CD47Q08722 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CD47Q08722 SPDYE22P-201ENST00000582158 798 ntBASIC13.5□□□□□ -0.25
CD47Q08722 LINC02560-201ENST00000596379 459 ntBASIC13.5□□□□□ -0.25
CD47Q08722 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.5□□□□□ -0.25
CD47Q08722 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.5□□□□□ -0.25
CD47Q08722 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD47Q08722 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD47Q08722 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD47Q08722 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CD47Q08722 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.5□□□□□ -0.25
CD47Q08722 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
CD47Q08722 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD47Q08722 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CD47Q08722 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CD47Q08722 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.5□□□□□ -0.25
CD47Q08722 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD47Q08722 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.5□□□□□ -0.25
CD47Q08722 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC13.5□□□□□ -0.25
CD47Q08722 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CD47Q08722 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD47Q08722 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD47Q08722 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.5□□□□□ -0.25
CD47Q08722 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD47Q08722 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.5□□□□□ -0.25
CD47Q08722 AC015688.4-201ENST00000580780 1647 ntBASIC13.5□□□□□ -0.25
CD47Q08722 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
CD47Q08722 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CD47Q08722 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD47Q08722 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD47Q08722 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.49□□□□□ -0.25
CD47Q08722 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CD47Q08722 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD47Q08722 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD47Q08722 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CD47Q08722 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD47Q08722 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD47Q08722 AMT-221ENST00000538581 2038 ntTSL 2 BASIC13.49□□□□□ -0.25
CD47Q08722 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
CD47Q08722 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD47Q08722 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CD47Q08722 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD47Q08722 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CD47Q08722 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD47Q08722 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CD47Q08722 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD47Q08722 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.49□□□□□ -0.25
CD47Q08722 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.49□□□□□ -0.25
CD47Q08722 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.49□□□□□ -0.25
CD47Q08722 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.49□□□□□ -0.25
CD47Q08722 BCRP1-201ENST00000444246 691 ntBASIC13.49□□□□□ -0.25
CD47Q08722 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.49□□□□□ -0.25
CD47Q08722 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.49□□□□□ -0.25
CD47Q08722 AL096865.1-201ENST00000606796 927 ntBASIC13.49□□□□□ -0.25
CD47Q08722 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD47Q08722 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD47Q08722 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.49□□□□□ -0.25
CD47Q08722 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD47Q08722 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CD47Q08722 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD47Q08722 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CD47Q08722 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CD47Q08722 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CD47Q08722 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD47Q08722 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CD47Q08722 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC13.49□□□□□ -0.25
CD47Q08722 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.49□□□□□ -0.25
CD47Q08722 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.49□□□□□ -0.25
CD47Q08722 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC13.48□□□□□ -0.25
CD47Q08722 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CD47Q08722 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD47Q08722 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC13.48□□□□□ -0.25
CD47Q08722 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CD47Q08722 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CD47Q08722 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD47Q08722 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13.48□□□□□ -0.25
CD47Q08722 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD47Q08722 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD47Q08722 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD47Q08722 TUBB8P4-201ENST00000511806 1324 ntBASIC13.48□□□□□ -0.25
CD47Q08722 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
CD47Q08722 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
CD47Q08722 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD47Q08722 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CD47Q08722 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD47Q08722 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD47Q08722 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms