Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.88■□□□□ 0.13
PMS1P54277 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
PMS1P54277 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
PMS1P54277 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
PMS1P54277 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PMS1P54277 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PMS1P54277 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PMS1P54277 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PMS1P54277 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PMS1P54277 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PMS1P54277 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PMS1P54277 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PMS1P54277 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PMS1P54277 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PMS1P54277 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC15.88■□□□□ 0.13
PMS1P54277 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PMS1P54277 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PMS1P54277 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PMS1P54277 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PMS1P54277 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
PMS1P54277 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PMS1P54277 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PMS1P54277 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PMS1P54277 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PMS1P54277 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.88■□□□□ 0.13
PMS1P54277 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PMS1P54277 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PMS1P54277 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
PMS1P54277 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC15.88■□□□□ 0.13
PMS1P54277 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
PMS1P54277 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
PMS1P54277 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PMS1P54277 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PMS1P54277 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PMS1P54277 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PMS1P54277 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
PMS1P54277 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.87■□□□□ 0.13
PMS1P54277 AC107918.4-201ENST00000641966 3141 ntBASIC15.87■□□□□ 0.13
PMS1P54277 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
PMS1P54277 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PMS1P54277 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
PMS1P54277 LAP3P2-201ENST00000454686 1454 ntBASIC15.87■□□□□ 0.13
PMS1P54277 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PMS1P54277 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PMS1P54277 AC234783.1-201ENST00000441761 496 ntBASIC15.87■□□□□ 0.13
PMS1P54277 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.87■□□□□ 0.13
PMS1P54277 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.87■□□□□ 0.13
PMS1P54277 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.87■□□□□ 0.13
PMS1P54277 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.87■□□□□ 0.13
PMS1P54277 AC003686.1-201ENST00000550956 1034 ntBASIC15.87■□□□□ 0.13
PMS1P54277 RAB43P1-201ENST00000561790 589 ntBASIC15.87■□□□□ 0.13
PMS1P54277 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.87■□□□□ 0.13
PMS1P54277 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC15.87■□□□□ 0.13
PMS1P54277 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.87■□□□□ 0.13
PMS1P54277 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.87■□□□□ 0.13
PMS1P54277 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PMS1P54277 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.87■□□□□ 0.13
PMS1P54277 AGAP12P-201ENST00000585227 2359 ntBASIC15.87■□□□□ 0.13
PMS1P54277 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
PMS1P54277 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.87■□□□□ 0.13
PMS1P54277 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC15.87■□□□□ 0.13
PMS1P54277 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PMS1P54277 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
PMS1P54277 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PMS1P54277 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
PMS1P54277 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PMS1P54277 NCLP1-201ENST00000445357 1963 ntBASIC15.87■□□□□ 0.13
PMS1P54277 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PMS1P54277 HADH-202ENST00000403312 1752 ntTSL 5 BASIC15.87■□□□□ 0.13
PMS1P54277 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PMS1P54277 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
PMS1P54277 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
PMS1P54277 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PMS1P54277 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PMS1P54277 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PMS1P54277 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.86■□□□□ 0.13
PMS1P54277 PPT1-213ENST00000641319 2388 ntBASIC15.86■□□□□ 0.13
PMS1P54277 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PMS1P54277 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PMS1P54277 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
PMS1P54277 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PMS1P54277 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
PMS1P54277 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PMS1P54277 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PMS1P54277 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PMS1P54277 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC15.86■□□□□ 0.13
PMS1P54277 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC15.86■□□□□ 0.13
PMS1P54277 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
PMS1P54277 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC15.86■□□□□ 0.13
PMS1P54277 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC15.86■□□□□ 0.13
PMS1P54277 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.86■□□□□ 0.13
PMS1P54277 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PMS1P54277 HLA-V-201ENST00000429037 534 ntBASIC15.86■□□□□ 0.13
PMS1P54277 CSF2RBP1-201ENST00000447905 391 ntBASIC15.86■□□□□ 0.13
PMS1P54277 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PMS1P54277 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.86■□□□□ 0.13
PMS1P54277 AC104989.1-201ENST00000519711 778 ntBASIC15.86■□□□□ 0.13
PMS1P54277 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.86■□□□□ 0.13
PMS1P54277 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.86■□□□□ 0.13
PMS1P54277 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms