Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM4SF1P30408 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TM4SF1P30408 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM4SF1P30408 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM4SF1P30408 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM4SF1P30408 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TM4SF1P30408 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TM4SF1P30408 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TM4SF1P30408 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
TM4SF1P30408 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TM4SF1P30408 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TM4SF1P30408 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TM4SF1P30408 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.52■□□□□ 0.4
TM4SF1P30408 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TM4SF1P30408 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TM4SF1P30408 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC17.52■□□□□ 0.4
TM4SF1P30408 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TM4SF1P30408 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TM4SF1P30408 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TM4SF1P30408 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TM4SF1P30408 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TM4SF1P30408 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC17.52■□□□□ 0.4
TM4SF1P30408 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TM4SF1P30408 ZNF877P-201ENST00000437614 612 ntBASIC17.52■□□□□ 0.4
TM4SF1P30408 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC17.52■□□□□ 0.4
TM4SF1P30408 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TM4SF1P30408 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
TM4SF1P30408 COQ10BP2-201ENST00000513804 724 ntBASIC17.52■□□□□ 0.4
TM4SF1P30408 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TM4SF1P30408 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC17.52■□□□□ 0.4
TM4SF1P30408 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TM4SF1P30408 GPI-205ENST00000586425 1799 ntTSL 5 BASIC17.52■□□□□ 0.4
TM4SF1P30408 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TM4SF1P30408 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC17.52■□□□□ 0.39
TM4SF1P30408 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TM4SF1P30408 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC17.52■□□□□ 0.39
TM4SF1P30408 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TM4SF1P30408 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TM4SF1P30408 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TM4SF1P30408 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
TM4SF1P30408 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
TM4SF1P30408 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TM4SF1P30408 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TM4SF1P30408 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TM4SF1P30408 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TM4SF1P30408 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TM4SF1P30408 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TM4SF1P30408 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TM4SF1P30408 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC17.51■□□□□ 0.39
TM4SF1P30408 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.51■□□□□ 0.39
TM4SF1P30408 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
TM4SF1P30408 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TM4SF1P30408 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TM4SF1P30408 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC17.51■□□□□ 0.39
TM4SF1P30408 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TM4SF1P30408 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC17.51■□□□□ 0.39
TM4SF1P30408 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TM4SF1P30408 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC17.51■□□□□ 0.39
TM4SF1P30408 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TM4SF1P30408 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TM4SF1P30408 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TM4SF1P30408 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TM4SF1P30408 RN7SL351P-201ENST00000469306 248 ntBASIC17.51■□□□□ 0.39
TM4SF1P30408 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
TM4SF1P30408 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TM4SF1P30408 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TM4SF1P30408 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TM4SF1P30408 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
TM4SF1P30408 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.51■□□□□ 0.39
TM4SF1P30408 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TM4SF1P30408 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TM4SF1P30408 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM4SF1P30408 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC17.5■□□□□ 0.39
TM4SF1P30408 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM4SF1P30408 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM4SF1P30408 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TM4SF1P30408 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM4SF1P30408 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM4SF1P30408 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TM4SF1P30408 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM4SF1P30408 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM4SF1P30408 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC17.5■□□□□ 0.39
TM4SF1P30408 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TM4SF1P30408 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC17.5■□□□□ 0.39
TM4SF1P30408 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM4SF1P30408 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM4SF1P30408 NQO2-204ENST00000380454 851 ntTSL 2 BASIC17.5■□□□□ 0.39
TM4SF1P30408 HLA-DMA-202ENST00000395303 1007 ntBASIC17.5■□□□□ 0.39
TM4SF1P30408 RPL10-203ENST00000406022 748 ntTSL 3 BASIC17.5■□□□□ 0.39
TM4SF1P30408 HMGA1P1-201ENST00000415560 1062 ntBASIC17.5■□□□□ 0.39
TM4SF1P30408 AC092810.2-201ENST00000431570 362 ntBASIC17.5■□□□□ 0.39
TM4SF1P30408 SOD2-205ENST00000444946 917 ntTSL 2 BASIC17.5■□□□□ 0.39
TM4SF1P30408 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC17.5■□□□□ 0.39
TM4SF1P30408 AC004801.1-201ENST00000549557 360 ntBASIC17.5■□□□□ 0.39
TM4SF1P30408 SRP14-208ENST00000560773 468 ntTSL 3 BASIC17.5■□□□□ 0.39
TM4SF1P30408 AC079414.2-201ENST00000567157 1104 ntBASIC17.5■□□□□ 0.39
TM4SF1P30408 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC17.5■□□□□ 0.39
TM4SF1P30408 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC17.5■□□□□ 0.39
TM4SF1P30408 PHF23-213ENST00000613632 850 ntTSL 5 BASIC17.5■□□□□ 0.39
TM4SF1P30408 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms