Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC072061.1-201ENST00000569710 2234 ntBASIC12.39□□□□□ -0.43
SDCBPO00560 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.39□□□□□ -0.43
SDCBPO00560 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
SDCBPO00560 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SDCBPO00560 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SDCBPO00560 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SDCBPO00560 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SDCBPO00560 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SDCBPO00560 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SDCBPO00560 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.39□□□□□ -0.43
SDCBPO00560 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SDCBPO00560 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
SDCBPO00560 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SDCBPO00560 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SDCBPO00560 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SDCBPO00560 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
SDCBPO00560 AC003102.2-201ENST00000589195 1469 ntBASIC12.39□□□□□ -0.43
SDCBPO00560 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SDCBPO00560 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SDCBPO00560 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SDCBPO00560 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.39□□□□□ -0.43
SDCBPO00560 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SDCBPO00560 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.39□□□□□ -0.43
SDCBPO00560 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SDCBPO00560 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SDCBPO00560 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SDCBPO00560 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SDCBPO00560 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SDCBPO00560 MRPL37P1-201ENST00000592451 1337 ntBASIC12.38□□□□□ -0.43
SDCBPO00560 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SDCBPO00560 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SDCBPO00560 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SDCBPO00560 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
SDCBPO00560 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.38□□□□□ -0.43
SDCBPO00560 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
SDCBPO00560 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SDCBPO00560 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SDCBPO00560 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.38□□□□□ -0.43
SDCBPO00560 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SDCBPO00560 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SDCBPO00560 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SDCBPO00560 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
SDCBPO00560 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SDCBPO00560 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.38□□□□□ -0.43
SDCBPO00560 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
SDCBPO00560 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SDCBPO00560 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.38□□□□□ -0.43
SDCBPO00560 EIF3FP3-201ENST00000434851 1086 ntBASIC12.38□□□□□ -0.43
SDCBPO00560 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC12.38□□□□□ -0.43
SDCBPO00560 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.38□□□□□ -0.43
SDCBPO00560 POLD4-211ENST00000539074 714 ntTSL 3 BASIC12.38□□□□□ -0.43
SDCBPO00560 TP53TG3HP-202ENST00000569755 579 ntBASIC12.38□□□□□ -0.43
SDCBPO00560 CLUHP6-201ENST00000580789 941 ntBASIC12.38□□□□□ -0.43
SDCBPO00560 PIGL-212ENST00000581006 554 ntTSL 4 BASIC12.38□□□□□ -0.43
SDCBPO00560 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC12.38□□□□□ -0.43
SDCBPO00560 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SDCBPO00560 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
SDCBPO00560 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.38□□□□□ -0.43
SDCBPO00560 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.38□□□□□ -0.43
SDCBPO00560 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SDCBPO00560 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SDCBPO00560 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SDCBPO00560 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.38□□□□□ -0.43
SDCBPO00560 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.38□□□□□ -0.43
SDCBPO00560 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.38□□□□□ -0.43
SDCBPO00560 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
SDCBPO00560 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SDCBPO00560 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SDCBPO00560 AL731571.1-201ENST00000617058 5428 ntBASIC12.38□□□□□ -0.43
SDCBPO00560 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.38□□□□□ -0.43
SDCBPO00560 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SDCBPO00560 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SDCBPO00560 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.38□□□□□ -0.43
SDCBPO00560 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SDCBPO00560 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SDCBPO00560 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SDCBPO00560 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SDCBPO00560 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
SDCBPO00560 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
SDCBPO00560 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SDCBPO00560 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
SDCBPO00560 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.37□□□□□ -0.43
SDCBPO00560 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SDCBPO00560 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SDCBPO00560 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
SDCBPO00560 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
SDCBPO00560 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.37□□□□□ -0.43
SDCBPO00560 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SDCBPO00560 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SDCBPO00560 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SDCBPO00560 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SDCBPO00560 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SDCBPO00560 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
SDCBPO00560 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SDCBPO00560 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SDCBPO00560 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SDCBPO00560 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SDCBPO00560 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
SDCBPO00560 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.37□□□□□ -0.43
SDCBPO00560 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms