Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 RET-205ENST00000615310 4337 ntTSL 5 BASIC15.58■□□□□ 0.08
CCDC170Q8IYT3 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC170Q8IYT3 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC170Q8IYT3 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC170Q8IYT3 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.58■□□□□ 0.08
CCDC170Q8IYT3 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.58■□□□□ 0.08
CCDC170Q8IYT3 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC15.58■□□□□ 0.08
CCDC170Q8IYT3 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC170Q8IYT3 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.58■□□□□ 0.08
CCDC170Q8IYT3 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.58■□□□□ 0.08
CCDC170Q8IYT3 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.58■□□□□ 0.08
CCDC170Q8IYT3 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.58■□□□□ 0.08
CCDC170Q8IYT3 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC170Q8IYT3 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC170Q8IYT3 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC15.58■□□□□ 0.08
CCDC170Q8IYT3 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC170Q8IYT3 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC15.58■□□□□ 0.08
CCDC170Q8IYT3 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CCDC170Q8IYT3 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC170Q8IYT3 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.58■□□□□ 0.08
CCDC170Q8IYT3 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC170Q8IYT3 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC15.58■□□□□ 0.08
CCDC170Q8IYT3 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC15.58■□□□□ 0.08
CCDC170Q8IYT3 STK25-235ENST00000543554 2556 ntTSL 2 BASIC15.58■□□□□ 0.08
CCDC170Q8IYT3 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CCDC170Q8IYT3 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CCDC170Q8IYT3 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC170Q8IYT3 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC170Q8IYT3 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CCDC170Q8IYT3 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 BAATP1-201ENST00000412284 1225 ntBASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 RNA5SP421-201ENST00000516864 134 ntBASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 CTBP2P3-201ENST00000585629 1255 ntBASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 AC008825.2-201ENST00000603374 718 ntBASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 STK40-201ENST00000359297 4837 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 MSTO2P-201ENST00000314835 1709 ntBASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CCDC170Q8IYT3 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC170Q8IYT3 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC170Q8IYT3 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC170Q8IYT3 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC170Q8IYT3 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC170Q8IYT3 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC170Q8IYT3 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CCDC170Q8IYT3 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC170Q8IYT3 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CCDC170Q8IYT3 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC170Q8IYT3 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC170Q8IYT3 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC170Q8IYT3 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.56■□□□□ 0.08
CCDC170Q8IYT3 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.56■□□□□ 0.08
CCDC170Q8IYT3 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.56■□□□□ 0.08
CCDC170Q8IYT3 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.56■□□□□ 0.08
CCDC170Q8IYT3 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms